Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2448 ATGGCAGACACGAACTCTGTTGAAGTTATATTGGACTTTCTGAGGAAGAATCGTTTTACAAGGGCTGAAGCAGCATTGCGTGGTGAGCTTAGTAGCCGTTCTGACTTAAATGGCTTTCTTGAGAAGCTTTCCTTGGAAGAAAGAACCTTGCACAATAAGTCAGAAAGTGACAAGGGGAAGCCAGTAGTAGAAATTCAAGGGTCAGGTTCTCATAATACTGTTGAAGTGTCAAAAGAATTGATTGTGAAGGAAATAGAGTGTGGGACTGGTAGGAATGAAACTGAAAGCAAATGGAAAAATGTACCTTCTGTCGGGGAACGGAATAAATTAAATGAAGTGGTTGGGGCAAGTGACAAAAGCTTAGCTTTCTCTAAAAGTCCAGAGGATGGTGCGTTGGATTTATATTCATGGAAGTTCAATTCTGGCAATGGTCCTGTGGAGCCTTTCCAAAATGATGTGGGCACAAGTTCCAACCGAAGTATGAAGGGCCCATCATCTCAGCAATCAAAATATCAAATGAGTGAAGCTGATGATGTGTCCAATACCATTGCAAAATCTGGAGGGGAAAATTCTGCTTCCACTGATAAGAAAGCCTCATGGCTTGGGAGTAGTAATACTAGAGCATCTGTGGAACCAAAGTACAAAGACATGCAAGCCAAAGAACGTAGGGAATCTGATCGGCAGCTTAAATATAACAATTCATCTTTTAAGGAGAACTTTGCAGATAATCCCTGGTCAACAACTGATGAGAATGTTTTTTCGTCTTCAGACATTTGGAGAGATTGTCCTGTCAAGACTGTTTTCCCCTTCTCTAAGGGCGATGTTTCTTCAAGTCGTGACAATGCACCTTATACAGACAAGAAAGAGGAAAAAAGAAGGTCAGAGATGAGTGATATTCGTGCATCAATAAAAGAGCAAGTGGATGAAGTTGGTAGGGCCGTTTACTTAGGCAAGTCACAAGGCAGTTCAGAACAGAAGACCATTGGTAGCATAAGCTTCCCTCTTGCACCTGGGAATCAGAAGGAAGAATTTCCTAGGCTTCCTCCTGTCAAACTAAAGTCAGAGGATAAGCCTTTGGCTATTCACTGGGAAGAAAAGTTTGAGCGTGATGGACCTGCTTCAAGAATAGCTGGTGCTGATGGCTCCTTAATCATAGGATCATATCTGGATGTGCCTGTTGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGAGGCAGTTGGCTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTGTCTGGTTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAATCCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGATAACGAAAAGGGAAATGGTCATGGAAGTGTTCCGGATCATCAGGACAGAGGTCCAGCCAAGGATGATGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCTGGAGAGCAATATCTTCAGGCAAAGAATGTTGAACCGGTTACAACTTCTGATGATCCTATTGGTCTTACAGTAACTGAGGTTTATGACAGGACTGATGCTGGTGATCTGATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAATCTCATGCGTGCAGAGCCTGGCTGGCAGGGCTTTGTCACCCAGACAGATGACCTAATCATGCTTGGAGATGGGAGGGTTCTTAATGAGAGTGGAAGATTACGACTTGAGGATGTTTGTATGGATGATGATCAGCATGGTTCAATTAGGTCAATTGGAGTGGGGATTAACAGTGATGCTGCAGATGTTGGCAGTGAAGTACGTGAAAGTTTGGTCGGTGGTAGCAGTGAAGGTGATTTAGAATATTTCCGTGACCATGATGTTGGACTTAGTGGCCCTAGACACTCTCATTGTGATCTGAATAAGAAATCTACGAATAAATTGAGCAAATATAAGAAGAAAAATGATAAGAATGAATTAAATAAGCATGTCATTGAGGACGATAAAGGCGCCTTCTTGCAGATGAAACCTCACACTGATGGGAGCTTCTCATTTCCCTTATCCCTGAAAGATGGTCCAACAGTTGAAGCTGGCCCTAGTAAGCCCCTGTGGTCAAACTGCAATGCTGATGAGAATGATGACTGTCTTAATGCACTTGTGGGATCTGATGATATGCTTGCTTTATGGAAGCGGCAGAGCAGTGATTCTTCCCCTGTGAAAAGTTTAAGGGATGAAAATAATGCTCATGTAAGGTCCACTAACTCTTCTCCAACTGTCTCAAATTATGGATATATTGAAAAGGAGCATGTCAAGCTTGAAGGGGATGTAAATGATGATGCTGCAAGGGAAGAAGATCTTGGGGCATCGTTGGAAGATGAAGAGGCTGCTGCTGTTCAAGAGCAAGTAAGGCAAATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAAAATTTCCATGTTGTTCTAAATTCTGTAATAGCTGGGCGATATCATGTCACTGAGTATCTTGGATCTGCTGCATTTAGCAAAGCTATACAGGCTCATGACCTGCATACTGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAAGACTTTTTTGATCAAAGCCTCGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGACCCTGCAGACAAGTATCACATTCTTCGGTTGTATGATTATTTCTATTATAGAGAACATCTGTTAATAGTATGTGAGCTACTTAAAGCAAACTTATATGAATTCCATAAATTTAATAGAGAATCAGGGGGAGAAGTGTACTTCACAATGCCCAGATTGCAGTCAATAACCATTCAATGTCTGGAAGCACTTCAGTTTCTGCACAGCCTTGGACTAATACATTGTGACTTGAAGCCTGAGAATATTTTGGTAAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGGAGTAGTTGTTTTGAGACAGATCACCTTTGTTCATATGTTCAGTCAAGGTCTTATCGAGCTCCAGAGGTTATTTTGGGACTCACATATGACAAGAAGATTGATATATGGTCACTGGGTTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCGGCAACATTACTTGCCCGAGTGATTGGCATCATTGGTCCAATTCATCAAAGCATGCTTGCAAAAGGACGGGATACATACAAGTATTTCACCAAAAATCATATGCTTTATGAAAGGAATCAGGAAACCAACAGGTTGGAGTACCTTATTCCAAAGAAGACATCCTTGAGGCATAGATTGCCAATGGGAGATCAAGGCTTCATTGATTTTGTTGCGCATTTGCTTGAGATTAACCCAAAGAAGCGGCCTTCTGCATCAGAGGCGCTGAAGCACCCATGGTTATCATACCCATATGAACCGATATCATCCTGA 3552 0.4153 MADTNSVEVILDFLRKNRFTRAEAALRGELSSRSDLNGFLEKLSLEERTLHNKSESDKGKPVVEIQGSGSHNTVEVSKELIVKEIECGTGRNETESKWKNVPSVGERNKLNEVVGASDKSLAFSKSPEDGALDLYSWKFNSGNGPVEPFQNDVGTSSNRSMKGPSSQQSKYQMSEADDVSNTIAKSGGENSASTDKKASWLGSSNTRASVEPKYKDMQAKERRESDRQLKYNNSSFKENFADNPWSTTDENVFSSSDIWRDCPVKTVFPFSKGDVSSSRDNAPYTDKKEEKRRSEMSDIRASIKEQVDEVGRAVYLGKSQGSSEQKTIGSISFPLAPGNQKEEFPRLPPVKLKSEDKPLAIHWEEKFERDGPASRIAGADGSLIIGSYLDVPVGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDESWFLAHEIDYPSDNEKGNGHGSVPDHQDRGPAKDDDDDQSFAEEDSYFSGEQYLQAKNVEPVTTSDDPIGLTVTEVYDRTDAGDLMAQYDGQLMDEEELNLMRAEPGWQGFVTQTDDLIMLGDGRVLNESGRLRLEDVCMDDDQHGSIRSIGVGINSDAADVGSEVRESLVGGSSEGDLEYFRDHDVGLSGPRHSHCDLNKKSTNKLSKYKKKNDKNELNKHVIEDDKGAFLQMKPHTDGSFSFPLSLKDGPTVEAGPSKPLWSNCNADENDDCLNALVGSDDMLALWKRQSSDSSPVKSLRDENNAHVRSTNSSPTVSNYGYIEKEHVKLEGDVNDDAAREEDLGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLTYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIHQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2448 1183 Pfam Protein kinase domain 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2448 1183 SUPERFAMILY Protein kinase-like (PK-like) 861 1176 IPR011009 -
Acco02g2448 1183 Coils Coil 824 844 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 758 786 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 146 228 - -
Acco02g2448 1183 Gene3D Phosphorylase Kinase; domain 1 866 953 - -
Acco02g2448 1183 FunFam Putative serine/threonine-protein kinase dyrk2 866 953 - -
Acco02g2448 1183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 998 1010 IPR008271 GO:0004672|GO:0006468
Acco02g2448 1183 MobiDBLite consensus disorder prediction 477 503 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 281 298 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 213 228 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 146 211 - -
Acco02g2448 1183 CDD PKc_DYRK_like 872 1174 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 270 298 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 50 70 - -
Acco02g2448 1183 MobiDBLite consensus disorder prediction 477 509 - -
Acco02g2448 1183 PANTHER DUAL SPECIFICITY PROTEIN KINASE 409 1174 - -
Acco02g2448 1183 SMART serkin_6 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2448 1183 ProSiteProfiles Protein kinase domain profile. 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2448 1183 FunFam Serine/threonine-protein kinase ppk15 951 1175 - -
Acco02g2448 1183 Gene3D Transferase(Phosphotransferase) domain 1 926 1174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2448 Acco-ChrAcco02 22142267 22152415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2448 871 1169 MAP Kinase Gene Family AT5G19010 31.348 4.47e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Acco02g2448 Pkinase 1.8e-51 CL0016