Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2419 ATGCCCCAGAATAATAATAAGATGATTATTTCCAAACAAGACCCATCATCGAATCCGATGCCTGATCTTTCTCTGCACATAAGCCTCCCAAACAGTGCCCCTTCTTCAATTTGCACTACTGGAAATAACAACAACAACGAAGAGGCAGATTCGTCGTCGTTTGATATTTGGAGAAGCAACACAGGAGAAGTAGACGGTGCCAAATCCCACAGTGAGAGTTCAATCAGAGAACAAACCCATCATCATCTCTCTCAATCTCTCTTGAATCGTGATCATCACCTTCCCCCAAGTGGCGGTTCTGAGGCTGAGAGCCCCTGGAGAAGAAGATTACTAAACGACGTCGTTATTGGAGAAGATGGTACTGGTAACGGTGGTTTTTGGGTTTCGCAGGGAGGACCCAACAATTCATCAAGAGCCGTAAGAGGAATCCCACTTCAAGATTCCAATAATATTTCCGTATACCCAATTCAACAATTCCCCTATTATCCTAATTACTCATCATCACCGTCTTCTACTTATCATAGTCTTGCTGCTAATCATAACCCAGTAATCTCCTCGAGGTTTAATGGGATAAGCATGGAGAGTTTAATAAGTCGACCCCTTCATCAACCGAACCACGAGGCGTTTCACTACTTGAACCATCATCATCTTCTTCAACAACAACACCATCAGTTTGGTTCATCAAACTCTGATTTAAATGGATTTGGGAGGTCATCGAAGATGTTGCCTAATAGGCTTCACAGTAATAAGAGAAACATGAGGGCTCCCAGAATGCGTTGGACTAGCTCCCTTCATGCTCGTTTTGTTCACGCCGTTGAGCTCCTTGGCGGCCATGAAAGAGCAACCCCTAAGTCAGTTTTGGAGCTCATGGATGTGAAAGATCTCACACTCGCTCATGTTAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCCTCAGATGGAGATGAAGATTTCATGAGCCTAACACCACCACCACCGAATGAAAATGAGAACTATTTTTCACCCAACAAAAGAGGCCCTACAAATGCATCATCTTTAGATCAGGATATGGCCTACACTAGCAGCATTCTGTGGGATAATTCTTCTAGTAGACGGGCATGGAAACAAGCTAGTTCCACAGATATAGATGGAATCAGACCACCACCTGATAATTTATCATCTTCTCATCACCACATAACTGAGAAACAGTCCGAGGGAAATACTTTTTTGCTATCAAGAAGCTTAAAGGACTCTGAGAATTTAAGCTTGGAGTTTACCCTAGGGAGATCAAACGAACATGCCTAG 1308 0.4327 MPQNNNKMIISKQDPSSNPMPDLSLHISLPNSAPSSICTTGNNNNNEEADSSSFDIWRSNTGEVDGAKSHSESSIREQTHHHLSQSLLNRDHHLPPSGGSEAESPWRRRLLNDVVIGEDGTGNGGFWVSQGGPNNSSRAVRGIPLQDSNNISVYPIQQFPYYPNYSSSPSSTYHSLAANHNPVISSRFNGISMESLISRPLHQPNHEAFHYLNHHHLLQQQHHQFGSSNSDLNGFGRSSKMLPNRLHSNKRNMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTPPPPNENENYFSPNKRGPTNASSLDQDMAYTSSILWDNSSSRRAWKQASSTDIDGIRPPPDNLSSSHHHITEKQSEGNTFLLSRSLKDSENLSLEFTLGRSNEHA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2419 435 MobiDBLite consensus disorder prediction 1 106 - -
Acco02g2419 435 MobiDBLite consensus disorder prediction 1 68 - -
Acco02g2419 435 MobiDBLite consensus disorder prediction 69 88 - -
Acco02g2419 435 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 309 IPR006447 GO:0003677
Acco02g2419 435 MobiDBLite consensus disorder prediction 376 412 - -
Acco02g2419 435 MobiDBLite consensus disorder prediction 332 351 - -
Acco02g2419 435 MobiDBLite consensus disorder prediction 313 351 - -
Acco02g2419 435 FunFam Myb family transcription factor 254 312 - -
Acco02g2419 435 SUPERFAMILY Homeodomain-like 253 310 IPR009057 -
Acco02g2419 435 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 20 433 IPR044847 GO:0000976|GO:0006355|GO:0010158
Acco02g2419 435 Gene3D - 255 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2419 Acco-ChrAcco02 21709993 21717848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2419 239 434 G2-like Transcription Factor Family AT5G16560 53.202 1.48e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco02g2419 None None None