Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2407 ATGATAACCAAGTTCATGAGCTTCAATAGACGGAGCAGAAGATCAGAAGAAGAACAAGACGACGACGAAGAAGAAGATCAGAGCTTCTTCATTCTACCCCATAATCGGTCTCTCTCTCATTCTTTTTTATTAATAAAATATTTGCCGTGGTACGTAGTGTGGAAGCATTTCATTCTGATATGGGCAGTGTACTCATCCTTCTTCACTCCCATGGAGTTCGGATTCTTCAGAGGCTTGCCGGAGGAGATTTTCCTCCTCGACATTGCCGGTCAATTTGCTTTCCTCGTCGATATCGTCATCCGATTCTTCCTCGCCTATCGCGATACCTCCTCAAATAATTGGATCTACAGTCACCGTCAAATCGCGAAGAGGTATTTGAAGTCTCGGTTCACACTTGATTTTCTGAGTTGTCTGCCCTGGGATTATATTTATAAGGCTGCTGGCAGGAAAGAGCCAGTGAGGTATCTTCTATGGATCAGGCTGTGGCGAGCACTTAGGGTGATTGAATTTTTTGAGGGGCTGGAGAAAGATCTTAGGATTAATTACCACTGTACTAGGATTGTCAAACTTATTGTTGTTGAGCTCTATTGCACACACACGGCTGCCTGCATTTTCTATTATCTTGCTACCACTTTGCCCCCCTCTAAGGAACGTCATACATGGATAGGCAGCTTGACGATGGGTGACTACAGCTACTCAGACTTTAGACATATTAGTCTTTGGAGGCGTTATGTGACAGCACTCTACTTTGCAATTGTTACCATGGTAACTGTTGGCTTTGGAGAAATTCATGCAGTCAATGTCAGAGAAATGATATTTGTCATGATATTTGTTTCCTCTGACATGATTTTGGGTGCTTACCTTCTTGGTAACATGACAGCATTGGTCGTGAAAGGATCAAGAACAGAGAAGTTTAGGGACAAAATGTCTGAACTTATCAAGTACATGAATAAAAATAATTTGGACAAGCAGATAACTAAGGAGATTAGAGGCCATTTGCGCTTACAGTATGACCGCAGTGACACTGAGGCTGCTATTGATGAAGAAATTCCAGTTTCTATCCGCACAAAGATTTCGATGGATTTGTATGAGCAGTTCATTCAGAAAGTTCATCTTTTCAAGGGATGCTCTTCTGGGTTTATTAAACATGTTGCAATCAATGTCCATGAGGAGTTTTTTCTCCCAGGAGAAGTTATTATGGAGCAAGGAGATGTGGTAGACCAACTTTACCTTGTGTGCCATGGTGAACTGGATGAGCTAAGAAAAGATGATGAAAGAGAAGAGCTAGTTAAGCAATATCAAACCTATGGTTCCTTTGGCGAGGTTTCCTTTCTTTGCAAGTTGCCTCAACCTTACATGGTTCGTGCTCGTGAATTTTGCAAAGTTCTGCGTCTAGATAAGATACCCTTCACAGAAACACTCAAGACATACTTCTTAGATGGTCGGATTATCTTGCAAAATCTTCTTGAGGGAAAAGACTCTGGTCTTCAGTGTCAGCTTTTGGAATCAGACTTCACCCTGACAATTGGAAATCGTGAAACAGAACTAGCTATGAGGACTAATTGTGCTGCCTATGAGGGGGATTTCTATCTTTTGAAACATTGGATTGAATCAGGACTAGATCCCAACAGAACTGATTATGATCGAAGATCACCTTTGCATATTTCTGCATCCAAAGGCTATGTAGATATTACTTGCTTTCTTATTGACCAGGGAGTGAATATTGATTTATCAGATAAGTTTGGGAATACTCCCTTGTTTGAAGCCATAAAGAATGGACATGAAGAAGTGGCTTCTTTGCTCGTAAGTAAGGGAGCTACTCTTACTATTGAAGATGCTGGAAGTTTTCTATGCATGACTGTTGCAACAAAGGAATTGGACCTTTTAAGAAAGCTTTTAGCCCATGGTATAGATCCAAATTCTAGAAATTATGATCAACGAACAGCTCTTCACATAGCTGCCTCGGAGGGTTTGTTCACAGTTGCTGAAATGCTCATAGAAGCAGGAGCAAGTGTTTTATCCACGGACAGGTGGGGACATACACCTCTTGATGAAGCTCGCATAGGTGGAAGTAGGAGCGTTATCAGATTGCTTGAAATAGCAAAAATTTCTCAGCTGGCTGATGTATCGGATGGTATTCAGGAAACACAAGATAAGCAGTTTGACGTATATACTGGCACCGAAGTAGCAGAAACGCTCGCCTCGTCGTCAGGAGATGGAAGTCTGAAAAAAGAAATGCGCAGTATTTCCTTTCCACCCATAAAAGGAAGGAAGAGCAGGAGCAATCCTGTGGGTTTCTGA 2301 0.4172 MITKFMSFNRRSRRSEEEQDDDEEEDQSFFILPHNRSLSHSFLLIKYLPWYVVWKHFILIWAVYSSFFTPMEFGFFRGLPEEIFLLDIAGQFAFLVDIVIRFFLAYRDTSSNNWIYSHRQIAKRYLKSRFTLDFLSCLPWDYIYKAAGRKEPVRYLLWIRLWRALRVIEFFEGLEKDLRINYHCTRIVKLIVVELYCTHTAACIFYYLATTLPPSKERHTWIGSLTMGDYSYSDFRHISLWRRYVTALYFAIVTMVTVGFGEIHAVNVREMIFVMIFVSSDMILGAYLLGNMTALVVKGSRTEKFRDKMSELIKYMNKNNLDKQITKEIRGHLRLQYDRSDTEAAIDEEIPVSIRTKISMDLYEQFIQKVHLFKGCSSGFIKHVAINVHEEFFLPGEVIMEQGDVVDQLYLVCHGELDELRKDDEREELVKQYQTYGSFGEVSFLCKLPQPYMVRAREFCKVLRLDKIPFTETLKTYFLDGRIILQNLLEGKDSGLQCQLLESDFTLTIGNRETELAMRTNCAAYEGDFYLLKHWIESGLDPNRTDYDRRSPLHISASKGYVDITCFLIDQGVNIDLSDKFGNTPLFEAIKNGHEEVASLLVSKGATLTIEDAGSFLCMTVATKELDLLRKLLAHGIDPNSRNYDQRTALHIAASEGLFTVAEMLIEAGASVLSTDRWGHTPLDEARIGGSRSVIRLLEIAKISQLADVSDGIQETQDKQFDVYTGTEVAETLASSSGDGSLKKEMRSISFPPIKGRKSRSNPVGF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2407 766 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Acco02g2407 766 ProSiteProfiles Ankyrin repeat profile. 645 677 IPR002110 GO:0005515
Acco02g2407 766 ProSiteProfiles Ankyrin repeat region circular profile. 645 677 - -
Acco02g2407 766 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Acco02g2407 766 SMART cnmp_10 372 489 IPR000595 -
Acco02g2407 766 Gene3D Jelly Rolls 360 478 IPR014710 -
Acco02g2407 766 Pfam Ankyrin repeats (3 copies) 523 612 IPR002110 GO:0005515
Acco02g2407 766 ProSiteProfiles Ankyrin repeat region circular profile. 581 612 - -
Acco02g2407 766 SMART ANK_2a 645 674 IPR002110 GO:0005515
Acco02g2407 766 SMART ANK_2a 612 641 IPR002110 GO:0005515
Acco02g2407 766 SMART ANK_2a 581 610 IPR002110 GO:0005515
Acco02g2407 766 SMART ANK_2a 548 577 IPR002110 GO:0005515
Acco02g2407 766 SMART ANK_2a 678 707 IPR002110 GO:0005515
Acco02g2407 766 MobiDBLite consensus disorder prediction 1 24 - -
Acco02g2407 766 Pfam Ion transport protein 53 294 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco02g2407 766 SUPERFAMILY Voltage-gated potassium channels 48 297 - -
Acco02g2407 766 PRINTS EAG/ELK/ERG potassium channel family signature 244 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco02g2407 766 PRINTS EAG/ELK/ERG potassium channel family signature 196 206 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco02g2407 766 PRINTS EAG/ELK/ERG potassium channel family signature 454 462 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco02g2407 766 PRINTS EAG/ELK/ERG potassium channel family signature 288 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco02g2407 766 PRINTS EAG/ELK/ERG potassium channel family signature 87 97 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco02g2407 766 Gene3D Helix hairpin bin 300 359 - -
Acco02g2407 766 ProSiteProfiles Ankyrin repeat region circular profile. 548 580 - -
Acco02g2407 766 CDD CAP_ED 372 485 IPR000595 -
Acco02g2407 766 FunFam Potassium channel SKOR 52 297 - -
Acco02g2407 766 Pfam Cyclic nucleotide-binding domain 392 476 IPR000595 -
Acco02g2407 766 SUPERFAMILY cAMP-binding domain-like 300 489 IPR018490 -
Acco02g2407 766 SUPERFAMILY Ankyrin repeat 521 698 IPR036770 -
Acco02g2407 766 Gene3D - 510 620 IPR036770 -
Acco02g2407 766 Pfam Ankyrin repeats (many copies) 632 686 IPR002110 GO:0005515
Acco02g2407 766 PANTHER POTASSIUM CHANNEL AKT1 23 732 IPR045319 GO:0005249|GO:0006813
Acco02g2407 766 ProSiteProfiles cAMP/cGMP binding motif profile. 372 491 IPR000595 -
Acco02g2407 766 Gene3D - 52 298 - -
Acco02g2407 766 Gene3D - 621 700 IPR036770 -
Acco02g2407 766 MobiDBLite consensus disorder prediction 734 766 - -
Acco02g2407 766 FunFam Potassium channel KAT2 360 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2407 Acco-ChrAcco02 21547957 21556514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2407 629 698 Ion Channels AT5G37500 33.696 2.88e-06 48.9