Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2406 ATGGCCCTTGTCCGCGATCGCCGCCACCTCAACCTCCGCCTCCCGATGCCAGAACCTTCCGAGCGCCGACCTCGCTTTCCGCTTCCCCTTCCTCCCTCTTCCAATCCATCTAACAATTCCGTCGCCGCCGATTTCGCCCCTAACGATCTAGAAAAGCTTCAGGTCCTCGGCCACGGCAACGGAGGCACCGTCTATAAGGTCCGTCACAAGCGCACCTCCGTCGTCTACGCTCTCAAGGTTGTCCACAGCGATTCCGATCCGATGATCCGCCGCCAAGTCCGGAGGGAAATGGATATCCTCCGCCGGACGGACTCGCCTTACGTCGTGCGGTGTGACGGATTCTTCGAGAAACCTTCCGGAGACGTGGCTATTGTTATGGAGTATATGGATGTGGGAACGCTAGACACGTTGTTGAAAAAAAACGGTACGTTTTCGGAAGCCCAACTCGCGGTGGTGGCGCGTCAGGTTTTAAACGGGCTGAGTTATCTCCACGCGCACAAGATTGTGCACCGCGATATCAAGCCTTCCAATCTCTTGGTGAATCAGAAAATGGAAGTGAAAATCGGTGATTTCGGAGTCAGCAAGATCATGTGCCGCACCCTGGACGCGTGCAATTCATACGTCGGGACCTGCGCGTACATGAGCCCGGAACGGTTCGACCCGGACACGTACGGCGGAAATTATAACGGGTATTCGGGTGACATATGGAGTCTGGGCCTGACCTTGTTCGAACTGTACGTGGGTCACTTCCCGTTCCTGCCGGCGGGTCAGAGACCCGATTGGGCGACCCTGATGTGTGCGATTTGTTTCGGAGACCCGCCCAGCTTGCCGGGGCAGTCCTCCAAAGAATTTCGGAGCTTCATAGATTGTTGCTTGAAGAAGGAATCCAGTGAGCGATGGAGTGCCTCCCAGCTTTTAAGTCATCCGTTTCTTTCGAAGAAATCGGGAAACAGTTAG 957 0.5538 MALVRDRRHLNLRLPMPEPSERRPRFPLPLPPSSNPSNNSVAADFAPNDLEKLQVLGHGNGGTVYKVRHKRTSVVYALKVVHSDSDPMIRRQVRREMDILRRTDSPYVVRCDGFFEKPSGDVAIVMEYMDVGTLDTLLKKNGTFSEAQLAVVARQVLNGLSYLHAHKIVHRDIKPSNLLVNQKMEVKIGDFGVSKIMCRTLDACNSYVGTCAYMSPERFDPDTYGGNYNGYSGDIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPSLPGQSSKEFRSFIDCCLKKESSERWSASQLLSHPFLSKKSGNS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2406 318 MobiDBLite consensus disorder prediction 1 20 - -
Acco02g2406 318 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 35 314 - -
Acco02g2406 318 MobiDBLite consensus disorder prediction 1 43 - -
Acco02g2406 318 Gene3D Phosphorylase Kinase; domain 1 33 125 - -
Acco02g2406 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Acco02g2406 318 ProSiteProfiles Protein kinase domain profile. 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2406 318 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2406 318 Gene3D Transferase(Phosphotransferase) domain 1 126 318 - -
Acco02g2406 318 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Acco02g2406 318 CDD PKc_MAPKK_plant_like 48 313 - -
Acco02g2406 318 SUPERFAMILY Protein kinase-like (PK-like) 47 312 IPR011009 -
Acco02g2406 318 FunFam Mitogen-activated protein kinase kinase 1 32 130 - -
Acco02g2406 318 Pfam Protein kinase domain 51 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2406 318 FunFam Mitogen-activated protein kinase 2 131 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2406 Acco-ChrAcco02 21522623 21523579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2406 1 311 MAP Kinase Kinase Gene Family AT1G18350 62.939 3.04e-139 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Acco02g2406 Pkinase 9.1e-66 CL0016