Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2388 ATGGTCTTCAAAGGTAGGTTCTTCAACTTCAAGAAATCCGACTCTTCTAGCCCCGATGGATCACCCAGTAGTCCTCGGTCATTTGGCTCCAATTCCCCCAGCAGATCCGACAAGAAGAAGGCCAAATCAACTGCTAAGGATTCACAGATCACTAACCCTGCGAGTGCCGCTGGGTTCGGCGATGCTTGCCGCCCTAAGCAAGTGAAGGACGGGACTAAGAAGAAGGATGCCAAAGGAAACGAGAGTCAGGCTCAACAAGAGCCCCCTTGGATACCGTCCAAGCCAAGCTCCGGCGGGGAATTGGGTTCCAGTTTGTCACCGAGTTCTGGGTTGAAGCCGAAGATGGTCACCGCTGCGGCGGCGGGTGGTCCTGCTAGCGGGAAGGAATCGCCATCGTCTTCGGTTTCGCCAATTTTAGCATCTTCACTTGGATTAAATAGGATAAAGACGAGATCAGGACCACTGCCACAGGAGAGCTTCTTCGGCTTTAGGAATGATAAAGGGTCGACACTTGGTGTGAGTAATCTCTCGAAGCCTGGCAGTGATGATGGAAAACTGAAGGAGCCTGTGAATTACCGTAAAGTGGCGTTTCAAGAGAGCTCTGGAAGCGGAAACTGGGTTGATAATGGAAACAATTCAGATAGCATGTCAACTGGGAGTGCTCCATCGAGGGACCAGAGCCCCAATGTATTGCCACGGTCGCGGCTACAGAACGCGGAATCATCAGCCGAATCAGGGAGACAAGAATCAACACGGTTTCAGTCTGAAGGCTTACGAAGTGCAGATGTTTGCACTCCAGAGACAACATATGATTATGAAAACCCCAAGGAGTCTGAATCTCCTCGTTTTCAAGCATTATTACGTGTTACAAATGCACCAAGAAAGAGGTTTCCTAATTGCATTAAGAGTTATTCTCATGAGCTGAATTCCAAAGGCGTCATTCGTCCTTTCCCATTTTGGAAGGCTCGAAGATTAAATAACTTGGAGGAGATCTTGGTTGTAATTAAGGCAAAATTCGATAAAGAAAAGGAAGAAGTGAATTCTGAGTTGGCTATTTTTGCAGCAGATCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAGTGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCTAGGAGCTGTGCTATGACTTCACCTGGGGAATTTTGGCTTCAGTGTGAAGGAATTGTTCAGGAATTGGATGATAAGCGTCAAGAACTTCCCCCTGGAATGCTAAAGCGGCTTCATACACAAATGCTCTTCATTCTCACCAGGTGTACAAGGTTATTGCAATTCCACAAGGAAAGTGGTTTGGCAGAGGATGAACATGTTTTTAATCTCCACCAATCTAGAGTCTTGCACTCTGCTGAAAAAAGGATTCCTCCTGGTATGGGAAGGGATGAAAAAAGCTTGAGCGCTACAAAGGCCTCAAAGGTGTCAAAAGCTTCTGCTAAAAAGTCTTATAGTCAGGAGCAGCATAGCTTCGAATTGAAGAAAGATGCTATGCAGCCTGAAAAACTTCCTCTCCATTCTGGTGACGCTTCAAAACAAGATTCTTTTTCAGGCATGGATTGGATGGGTCCTTGGAAGAAATTCCTATCTCCAGTAAGTAAAAGCCCAAAAGAAGCAACTCAGATGAAGGACCAGAATCTTGGAAAGGTTGAACCTTCAAAGCTATCAATTAATAAGAGATCAAATTCTGATGTGGATCTGTCAGCCCCAAAGCCATCTGAGCTTATTAAGGATTCCCATGAACATGTTTCCAAACATCAGCACAAAGTTTCTTGGGGCTACTGGGGTGAGCATCAGAGTATTGTTGAGGAGAACTCGATAATTTGTCGTATATGTGAGGAGGAAGTTGCTACTTCACATGTTGAAGAACATTCAAGGATTTGTGCAATTGCTGATAGATGTGATCAGAAGGGTCTGAGTGTCAATGAACGCCTTGTCAGAATTGCTGAAACTTTAGAAAAGATGATGGAATCATGTATGCAGAAGGATATCCAGCAAATAGTGGGAAGTCCTGATGTGGGAAAGGTGTCAAATTCAAGTATGACTGAAGAATCTGATGTTCTCTCTCCTAAACTCAGTGATTGGTCTCGAAGAGGTTCAGAGGATATGTTAGATTGTTTCCCTGAAGCTGATAATTCTGCTTTTATGGATGACCTGAAGGGGCTACCTCCGATATCATGTAAAACTCGCTTTGGTCCCAAGTCTGACCAAGGCATGGCAACTTCATCTGCTGGGAGCATGACTCCCAGGTCTCCCTTGATGACGCCAAGGACAAGTCAGATTGATTTACTCTTGGCGGGGAAGGGTGCTTATTCTGAACATGATGATTTTCCCCAGATGAATGAACTTGCTGATATAGCACGGTGTGTAACAACTGCACCTCTGGATGATGTTCGCTCGATATCATATCTATTATCTTGTCTTGAAGATTTGCAAGTTGTTGTAGACCGGAGAAAATTTGATGCACTCACAGTGGAGACCTTTGGAGCGCGCATTGAGAAGTTGATACGGGAAAAGTATTTGCAGCTTACTGAGATGGTGGAGGATGAAAAGATAGACATAACGAGCACTGTTATTGATGAAGATGCTCCCTTGGATGATGATGTGATTCGTAGCTTGAGAACAAGTCCTAACCATTCTTCAAAAGACCGTACTACCATTGATGATTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAATAACTGGGGATCTTTTTGCAATAAAGGTTCTTAAGAAGGCAGATATGATCCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAACCCTTTTGTGGTTCGTTTCTTCTATTCATTTACATGTAGTGAGAACTTGTATCTTGTCATGGAATATCTTAATGGAGGCGACCTCTATTCACTATTAAGGAATTTAGGCTGCCTGGATGAGGAAATTGCTCGTGTATATATAGCTGAAGTGGTGCTTGCGTTGGAATATTTACATTCACTGAGGGTGGTTCATCGTGACTTGAAGCCAGACAATTTGTTGATTGCACATGATGGTCATATTAAGTTGACGGATTTTGGGCTTTCAAAAGTAGGTCTAATCAACAGCACTGATGACTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGTGAGGATGAACCTCAGTTATCTACATCTGAGAATCAAAGTGATAGAAGGAAGAAACGTTCTGCTGTGGGTACACCTGATTATTTAGCACCAGAGATACTCTTGGGAACTGGGCATGGGTATACTGCAGATTGGTGGTCTGTTGGCGTTATTTTATTTGAATTGCTTGTTGGCATTCCTCCTTTCAATGCAGGGCATCCTCAGATGATATTTGATAATATCCTTAATCGCAATATACCATGGCCCCGGGTGCCAGAAGAAATGAGTCCTGAAGCACAAGATCTTATTGATCGGTTACTGACTGAGGATCCTAATCAGAGACTTGGAGCGAGGGGAGCATCGGAGGTGAAGCAGCATATTTTCTTCAAGGATATAAACTGGGATACTCTTGCCAGGCAGAAGGCTGCATTTGTGCCATTCTCTGAGAGTGCTCTGGACACAAGTTATTTCACCAGCCGGTATTCATGGAATGCATCCGATGGCCTCGTGTATCCAGCTAGTGACATTGAGGAATATAGTGATGCTGATAGCTTAAGTGGCAGTAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGTGGTCTTGCAGAGTTTGAGCCTGGTTCCTCTGCCAATTACTCCTTTAGTAATTTTTCCTTCAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTTCTCACCAAGGGATTGAAAGATGACCCACCTCCAAACTCTAGTGCATAA 3933 0.4406 MVFKGRFFNFKKSDSSSPDGSPSSPRSFGSNSPSRSDKKKAKSTAKDSQITNPASAAGFGDACRPKQVKDGTKKKDAKGNESQAQQEPPWIPSKPSSGGELGSSLSPSSGLKPKMVTAAAAGGPASGKESPSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRNDKGSTLGVSNLSKPGSDDGKLKEPVNYRKVAFQESSGSGNWVDNGNNSDSMSTGSAPSRDQSPNVLPRSRLQNAESSAESGRQESTRFQSEGLRSADVCTPETTYDYENPKESESPRFQALLRVTNAPRKRFPNCIKSYSHELNSKGVIRPFPFWKARRLNNLEEILVVIKAKFDKEKEEVNSELAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSPGEFWLQCEGIVQELDDKRQELPPGMLKRLHTQMLFILTRCTRLLQFHKESGLAEDEHVFNLHQSRVLHSAEKRIPPGMGRDEKSLSATKASKVSKASAKKSYSQEQHSFELKKDAMQPEKLPLHSGDASKQDSFSGMDWMGPWKKFLSPVSKSPKEATQMKDQNLGKVEPSKLSINKRSNSDVDLSAPKPSELIKDSHEHVSKHQHKVSWGYWGEHQSIVEENSIICRICEEEVATSHVEEHSRICAIADRCDQKGLSVNERLVRIAETLEKMMESCMQKDIQQIVGSPDVGKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKGLPPISCKTRFGPKSDQGMATSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDFPQMNELADIARCVTTAPLDDVRSISYLLSCLEDLQVVVDRRKFDALTVETFGARIEKLIREKYLQLTEMVEDEKIDITSTVIDEDAPLDDDVIRSLRTSPNHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRITGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLDEEIARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQLSTSENQSDRRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAGHPQMIFDNILNRNIPWPRVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKQHIFFKDINWDTLARQKAAFVPFSESALDTSYFTSRYSWNASDGLVYPASDIEEYSDADSLSGSSSCLSNRQDEVGDECGGLAEFEPGSSANYSFSNFSFKNLSQLASINYDLLTKGLKDDPPPNSSA 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2388 1310 MobiDBLite consensus disorder prediction 10 32 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 681 702 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 681 697 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 1074 1088 - -
Acco02g2388 1310 ProSiteProfiles AGC-kinase C-terminal domain profile. 1188 1292 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco02g2388 1310 MobiDBLite consensus disorder prediction 743 761 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 127 148 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 82 111 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 462 522 - -
Acco02g2388 1310 SMART serkin_6 898 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2388 1310 PANTHER SERINE/THREONINE-PROTEIN KINASE 563 1281 - -
Acco02g2388 1310 Gene3D Transferase(Phosphotransferase) domain 1 982 1205 - -
Acco02g2388 1310 SUPERFAMILY Protein kinase-like (PK-like) 895 1224 IPR011009 -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 559 576 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 540 577 - -
Acco02g2388 1310 CDD STKc_MAST_like 904 1192 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 738 761 - -
Acco02g2388 1310 FunFam probable serine/threonine protein kinase IREH1 896 985 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 66 81 - -
Acco02g2388 1310 Coils Coil 325 345 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 196 262 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 1 278 - -
Acco02g2388 1310 Gene3D Phosphorylase Kinase; domain 1 896 1216 - -
Acco02g2388 1310 ProSiteProfiles Protein kinase domain profile. 898 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2388 1310 Pfam Protein kinase domain 898 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2388 1310 MobiDBLite consensus disorder prediction 479 494 - -
Acco02g2388 1310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1017 1029 IPR008271 GO:0004672|GO:0006468
Acco02g2388 1310 MobiDBLite consensus disorder prediction 495 510 - -
Acco02g2388 1310 MobiDBLite consensus disorder prediction 1059 1088 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2388 Acco-ChrAcco02 21311950 21335887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2388 1 1304 AGC Kinase Gene Family AT3G17850 65.837 0.0 1626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Acco02g2388 Pkinase 1.7e-64 CL0016