Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2387 ATGGAACGCGATTTTCTGGGTTTGAGTTCAAAGATCAGTTCGGCAACTAAGAAAGAGGATGCTACTGGTAAAGCAAACGATCCAGTGAAAGGTTCAGGAATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCTGTTCCTCAATTGTTGTCCTTTAAGACTCCCCCGGAAGATAGGACAAGAAAGACCACATCATCAGCTGATGCTTTTGACTCTAACCAGAAACCATTCATGGGTGTGATCCAGAAAAGCTTGAGCATGGGAAAAGTAGTAGGAAACGAACGTGGAATGACAGTTTACCCTATACAACAAGTTGATACACTTTCAGGCTACCCTCAAGAAGCCAGAACATTTTCAGTCTCCAACCAATCAAATCAGAGGAGTACTGTTCTCCAATCTACTGTAAGTACCAATGTTCAGAACATGGTCAACCCTACCATAAAACCACACCCTCAAGGAGGAGTCCTTCTTATTGCCCCTGTACCTGTTCTTCCATCAAACGGTTCTGTTGTTGGCACCACTGACTTGAGGAACTCGTCGGAACCCTCTGTCCAACCTTCTCAGCTGACCATTTTCTATGCTGGTTCAGTGTGTGTTTATGAAGACATATCACCTGAGAAGGCCCAGGCTATTATGTTATTGGCTGGAAATGGGAATACTCCAAATCAAAACAAGGCAGTTTCAACAGCTCCAGTGCAGACACCAATCTCCAAGCCATCTAAAGATGACGGGTTTATTGTGAGCCAATCCTACCATTCGCCTTTACCGAGTTCGATTCCCATGACCTTCCATGCTAGTTCTCAGCCTGTAGGAGGATCTCCTAGCACCAATGAACCTGCAATTGTGAGACCAGTAGCATCTTCTGCTGCCCCAAGTAGCCACTTGGAGCCTTCTAGTGTAGCTGGCTCTTCAAAATCTGCAGCCACAAAAATTGGTTCACCTGTGGACTTGCCTCAGGCACGGAAAGCATCCTTGGCCCGGTTCTTAGAGAAGCGTAAGGAAAGGGTGACTAGCACATCACCATACCATATGAACAAGAAATCACCAGAATGTGGCAATCCAGGAACAGAAAGTATTAGTTTCTCCATCACATTCACTGGTTCCTGTCCCCTACCTGCCATGAACTAA 1125 0.456 MERDFLGLSSKISSATKKEDATGKANDPVKGSGMQWSFSNKVSAVPQLLSFKTPPEDRTRKTTSSADAFDSNQKPFMGVIQKSLSMGKVVGNERGMTVYPIQQVDTLSGYPQEARTFSVSNQSNQRSTVLQSTVSTNVQNMVNPTIKPHPQGGVLLIAPVPVLPSNGSVVGTTDLRNSSEPSVQPSQLTIFYAGSVCVYEDISPEKAQAIMLLAGNGNTPNQNKAVSTAPVQTPISKPSKDDGFIVSQSYHSPLPSSIPMTFHASSQPVGGSPSTNEPAIVRPVASSAAPSSHLEPSSVAGSSKSAATKIGSPVDLPQARKASLARFLEKRKERVTSTSPYHMNKKSPECGNPGTESISFSITFTGSCPLPAMN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2387 374 MobiDBLite consensus disorder prediction 332 354 - -
Acco02g2387 374 MobiDBLite consensus disorder prediction 242 274 - -
Acco02g2387 374 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 31 353 IPR040390 -
Acco02g2387 374 MobiDBLite consensus disorder prediction 48 70 - -
Acco02g2387 374 Pfam tify domain 184 215 IPR010399 -
Acco02g2387 374 Pfam Jas motif 317 341 IPR018467 -
Acco02g2387 374 MobiDBLite consensus disorder prediction 290 309 - -
Acco02g2387 374 MobiDBLite consensus disorder prediction 223 315 - -
Acco02g2387 374 SMART tify_2 181 216 IPR010399 -
Acco02g2387 374 MobiDBLite consensus disorder prediction 340 354 - -
Acco02g2387 374 ProSiteProfiles Tify domain profile. 181 216 IPR010399 -
Acco02g2387 374 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2387 Acco-ChrAcco02 21278890 21282584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2387 34 358 Tify Gene Family AT3G17860 37.255 5.11e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco02g2387 tify 1.1e-17 No_clan