Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2365 ATGGCCTCTCCATTCAATTACCACAGGACGTGGTGCGACCAAACCATACACGGCACTGGCGCTGCAAACCATTTCGCGCCTTTCCGGTGCTTGCATGATGCAATCACCGGGCAGATCAGAGCGACACAGAAGAGCGTTGGAGAGCGAGATTCAGCAGGAAACAATAAAGGAGTTGGAATATCAAGACTCCGCTCTCCCAAAGATCCTGAGAAGGCAATGATAGCAAGGCGGACAGGTCTGACTAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAGGAGATGTAG 315 0.4921 MASPFNYHRTWCDQTIHGTGAANHFAPFRCLHDAITGQIRATQKSVGERDSAGNNKGVGISRLRSPKDPEKAMIARRTGLTRSQVSNWFINARVRLWKPMIEEM 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2365 104 Gene3D - 4 104 - -
Acco02g2365 104 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 66 104 - -
Acco02g2365 104 MobiDBLite consensus disorder prediction 42 69 - -
Acco02g2365 104 SUPERFAMILY Homeodomain-like 65 103 IPR009057 -
Acco02g2365 104 SMART HOX_1 55 103 IPR001356 GO:0003677
Acco02g2365 104 Pfam Homeobox KN domain 66 95 IPR008422 GO:0003677|GO:0006355
Acco02g2365 104 CDD homeodomain 66 100 IPR001356 GO:0003677
Acco02g2365 104 ProSiteProfiles 'Homeobox' domain profile. 66 99 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2365 Acco-ChrAcco02 20976561 20977660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2365 16 104 Homeobox Transcription Factor Family AT2G16400 39.041 6.56e-24 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Acco02g2365 Homeobox_KN 6.4e-11 CL0123