Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2353 ATGAAGAACATTCTCAAGAAGCTTCATATTATGCCCCATCAATCAGAAGATACTGAAGGGTCTACGTCGTCGAGGGGAAACAAGTCAAACGATAGTCCATCCCCTAAGAAGCCTTCTCACTCACGATTTTCTCAAATCCCTGAGAATAAACCCCTTTCAGGGCTTTCAAATTGGTTGCATGCAGTTGCTAATAAGCAGAGTCCTAGAACGGAACCGTCTGATTCAATGAGTAGTGGTGGTCTGGATACTGTTTCTGATTCTGCTATGTGTGATACAACAAATTCTAGCACTTCCAAGGATCCCGAAATAGAGGAAGAGTATCAGATTCAACTGGCTTTAGAGTTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAAATTGAAGCTGTTAAGCAAATCAGTTTAGGCTCTTGTGACCCTGACAATACACCAGCTGAAGTTGTAGCCTATCGATACTGGAATTACAACGCTCTTGGATATGATGACAAGATTTTAGATGGTTTCTATGATTTTTATGGGGTCTTGACTGAGTTGGCTTCTGCAAGAATGCCTTCCCTCATAGATCTGCAAGGAACATCAATCTCAGAAGGTGTCACATGGGAAGCAGTCTTAGTCAACAGGGCCGCTGATTCTAATTTGTTAAAACTTGAGCAAAAAGCCCTAGAGTTAGCAAGCAAGTCAAGATCAGATGTTGACGTAGCAGTAAGTAGGAATTTGGTGAAGAAGCTTGCCATATTAGTGGCTGACTATATGGGTGGACCAGTTTCAAATCCTCAGCACATGACAAGTGCATGGCAGAGTCTTAGTTATAGTCTAAAATCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACCATTGGATTGGCTCGGCACCGTGCATTGTTATTTAAGGTTTTAGCTGATTGTGTGGGTGTTCCATGTCGGTTGGTCAAAGGACAGCAATATACGGGTTCTGATGATGTGGCGATGAACTTTATCAGGATTGGTGATGACAGGGAGTACATTGTTGACCTAATGGCTGATCCAGGAACACTTATTCCAGCTGATGCAACTGAATCGCATATTGACTATAATGAATCAATACTTTTGAGCATTCCTTCAACAAGAGACCTTGATTCCTCTCATGGGGCATTGTTCAGTAGAGGCATTGGAAGTTCAGTAGAAGAAACTTCAGACTCCAGGGCATTGGACAGTTCAAAGAAATCAAAGCAGCTTGCCTCTGTCGGATCTGACAAAAGCAGGCCTGCTTCTGGCAAGGAAGATCCAAAGAGACCCCTTTATACTTTCAAAAGTCCCCTCAATGTTGAGAAAATTGCGGTGGAAACTCCTAGTAGGTCAAATTATGCCCATGGACACGCAAGATCACCTTCTTGGACAGAAGGGATCAGTTCCCCTGCAGCTCATAGAATGAAGGTTAAAGATGTTTCACAATATATGATTGATGCTGCCAAAGATAATCCTAACTTGGCTCAAAAGCTTCATGATGTTTTACTTGAAAGTGGTGTTGCTGCTCCTGCAAACTTATTTTCTGAGATTTATAATGAACAACTTGGTGCCCCATCCTTGATTGAAGAAAAAGATGAACTTAAACAGGGGACTACCCAGCAAGATATTAAGGTTGCTGATAATCTAGGTCCAGCTCAAATTTTGCCTCCTTTGCCTCACTATAAAATTCATTCCAAAGCAAGCACTAGCAGTCAGCCAGAGCATTTGAAGCCTGTAGAAGGTTTAGGAACCAACTTTACTCTTGATACAAAGGAAGCAGCTAGTCAGCAAACACCTTTATCACAAGAAGAAGCAAGACCAGTGAAATATGGGAAAAATGTCCCAGTTGCTGCAGCTGCGGCAGCAGCGGCTGCTGTTGTTGCATCTTCCATGGTAGTTGCTGCGGCAAAGTCAAGCACTGACTCAAAGATTGAGCTTCCTGTAGCAGCTGCTGCAACTGCTACCGCTGCGGCTGTTGTTGCAACCACTGCGGCTGTCAGTAAACAGTATGAGCAGGGCAGTCGGAGTGATGGAGATACAGACGGTGGTTATGAGCCAAAGGGTAGTGGTGATGGAGAGCATGGTACTTTAGGAGAAAACTCAGAAGGCGAGAGAATATCTGATAAATCAGTGAGTAATGAAAGCACAAAATCTGATTCTGCACTAGATGATGTTGCTGAGTATGAGATTCCGTGGGAGGAAATGGTGCTGGGTGAGCGCATTGGACTTGGGTCATATGGGGAGGTCCACCATGGCGAATGGAGAGGAACTGAAGTTGCTGTAAAAAGGTTTCTAGATCAAGATATATCTGGTGAATCACTAGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTATTCATGGGAGCTGTAATTCGACCTCCAAATCTGTCAATTGTTACCGAATTTCTTCCCAGAGGCAGTTTGTATAGATTAATTCACCGTCCTAACAGTCACTTAGATGAGCGAAGGCGATTGAGGATGGCCCTCGATGCTGCTCGTGGAATGAATTATTTGCACAACTGCTCTCCAATGATAGTCCATCGTGATTTGAAGTCCCCGAATCTTCTCGTTGACAAAAATTGGGTTGTGAAGGTTTGTGATTTTGGGTTATCACGAATGAAGCACAGTACATTCCTCTCTTCCCGGTCAACTGCTGGGACTGCGGAGTGGATGGCTCCAGAAGTGTTACGAAATGAACCTTCAAATGAAAAGTGTGATGTTTATAGCTTTGGCGTCATATTATGGGAGCTCTTGACACTGCAGCAGCCATGGGGAGGAATGAATCCGATGCAAGTTGTTGGCGCTGTAGGTTTCCAACATCGCCGGCTCGACATTCCTGACAACATGGACCCTGCCGTTGCTGACATTATCAGGAAATGCTGGCAGACAGATCCAAAGCTGAGGCCCACATTTGCTGAGATCATGGCGGCTCTGAAGCCATTACTGAAGCCAATAATCAGTTCTCACATGGCCAGGTCTGGCACGGAGTCAAAGCGAATCGTAGAAGACGCTGCAGGATGA 3036 0.443 MKNILKKLHIMPHQSEDTEGSTSSRGNKSNDSPSPKKPSHSRFSQIPENKPLSGLSNWLHAVANKQSPRTEPSDSMSSGGLDTVSDSAMCDTTNSSTSKDPEIEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDFYGVLTELASARMPSLIDLQGTSISEGVTWEAVLVNRAADSNLLKLEQKALELASKSRSDVDVAVSRNLVKKLAILVADYMGGPVSNPQHMTSAWQSLSYSLKSTLGSMVLPLGSLTIGLARHRALLFKVLADCVGVPCRLVKGQQYTGSDDVAMNFIRIGDDREYIVDLMADPGTLIPADATESHIDYNESILLSIPSTRDLDSSHGALFSRGIGSSVEETSDSRALDSSKKSKQLASVGSDKSRPASGKEDPKRPLYTFKSPLNVEKIAVETPSRSNYAHGHARSPSWTEGISSPAAHRMKVKDVSQYMIDAAKDNPNLAQKLHDVLLESGVAAPANLFSEIYNEQLGAPSLIEEKDELKQGTTQQDIKVADNLGPAQILPPLPHYKIHSKASTSSQPEHLKPVEGLGTNFTLDTKEAASQQTPLSQEEARPVKYGKNVPVAAAAAAAAAVVASSMVVAAAKSSTDSKIELPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDTDGGYEPKGSGDGEHGTLGENSEGERISDKSVSNESTKSDSALDDVAEYEIPWEEMVLGERIGLGSYGEVHHGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNSHLDERRRLRMALDAARGMNYLHNCSPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELLTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAVADIIRKCWQTDPKLRPTFAEIMAALKPLLKPIISSHMARSGTESKRIVEDAAG 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2353 1011 ProSitePatterns Protein kinases ATP-binding region signature. 737 758 IPR017441 GO:0005524
Acco02g2353 1011 PRINTS Tyrosine kinase catalytic domain signature 954 976 IPR001245 GO:0004672|GO:0006468
Acco02g2353 1011 PRINTS Tyrosine kinase catalytic domain signature 910 932 IPR001245 GO:0004672|GO:0006468
Acco02g2353 1011 PRINTS Tyrosine kinase catalytic domain signature 891 901 IPR001245 GO:0004672|GO:0006468
Acco02g2353 1011 PRINTS Tyrosine kinase catalytic domain signature 805 818 IPR001245 GO:0004672|GO:0006468
Acco02g2353 1011 PRINTS Tyrosine kinase catalytic domain signature 844 862 IPR001245 GO:0004672|GO:0006468
Acco02g2353 1011 MobiDBLite consensus disorder prediction 1 103 - -
Acco02g2353 1011 Pfam Ethylene-responsive protein kinase Le-CTR1 144 347 - -
Acco02g2353 1011 Gene3D Phosphorylase Kinase; domain 1 724 808 - -
Acco02g2353 1011 ProSiteProfiles Protein kinase domain profile. 731 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2353 1011 CDD STKc_MAP3K-like 737 983 - -
Acco02g2353 1011 MobiDBLite consensus disorder prediction 670 684 - -
Acco02g2353 1011 Pfam Protein tyrosine and serine/threonine kinase 732 983 IPR001245 GO:0004672|GO:0006468
Acco02g2353 1011 MobiDBLite consensus disorder prediction 664 718 - -
Acco02g2353 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Acco02g2353 1011 FunFam Serine/threonine-protein kinase isoform 1 722 809 - -
Acco02g2353 1011 MobiDBLite consensus disorder prediction 15 52 - -
Acco02g2353 1011 FunFam Serine/threonine-protein kinase CTR1 810 993 - -
Acco02g2353 1011 MobiDBLite consensus disorder prediction 390 429 - -
Acco02g2353 1011 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 98 992 - -
Acco02g2353 1011 Gene3D Transferase(Phosphotransferase) domain 1 810 994 - -
Acco02g2353 1011 SMART serkin_6 731 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2353 1011 MobiDBLite consensus disorder prediction 59 97 - -
Acco02g2353 1011 SUPERFAMILY Protein kinase-like (PK-like) 713 981 IPR011009 -
Acco02g2353 1011 MobiDBLite consensus disorder prediction 693 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2353 Acco-ChrAcco02 20840713 20848284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2353 1 997 MAP Kinase Kinase Kinase AT1G73660 63.189 0.0 1157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco02g2353 PK_Tyr_Ser-Thr 3.5e-67 CL0016