Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2342 ATGGGTGGTGGAACGACACTGGTGGACGGGATTCGTCGCCTTTTTCAACGTCGACCGTCATCTGCGATCAAGTCCTCTGATGACGAGGCGAGCCACAATCATAACTATCACAATGCCGATCGTATGGCTAGTAGCAACAATAGCCACAAGTTCGTGAGAGATTTGCGCGCTCAATTAGCCACTCTTCCCATACAGGAGAGAGAGGAAGGCGAGGGGGTCGATGATGGGCTCACGATTGATGATGATTTTGATATCTCTGGCTTGAAGATTATCAAGGTTCCCACACGGGCGTACTTCGAAGCTGCTTCCATGGATCCTACAAAGAAGACGTCAGAAACAGAGTTCTTCACTGAGTATGGAGAGGCAAGTCGATATCAGGTCCAAGAAGTTATTGGAAAAGGAAGTTATGGTGTTGTAGGCTCTGCAATTGATACTCATACAGGGGAAAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACACGGATTCTAAGAGAAATTAAACTCCTCCGGTTGCTCCGACACTCTGATATAGTAGAAATCAAGCATATAATGCTTCCTCCTTCACGGCGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCTAATGATGATCTTACACCTGAGCACCATCAATTTTTCTTGTACCAACTTCTTCGGGGCCTGAAATATATACATTCTGCTAATGTGTTTCATCGTGATTTAAAGCCCAAGAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGGCTTGCTCGAGTTTCGTTTAATGATGCACCTTCTGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCGCCAGAATTATGCGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATCGGATGCATATTTGCTGAAATGCTCTCTGGGAAACCATTGTTTCCTGGTAAAAATGTCGTGCACCAGTTGGATCTCATGACTGATTTACTTGGTACTCCTCCTGCTGAAACCGTTTCGAGGATTCGTAATGAGAAGGCTAGAAGGTACCTTGCTAACATGCGGAAAAAGCAACCAGTTCCTCTTTCTCAAAAGTTCCCTCGTGCAGATCCATTGGCCCTTCGTCTACTGGAGCGCCTGCTCGCATTTGATCCTAAAGATCGTCCTTCAGCGGAAGAGGCATTAAGTGATCCTTACTTTCGTGGTTTGGCAAATGTTGAGCGTGAACCAGCAGCTCCTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGACTAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCTCAAATGCTCCATGAATATCTGCGTGGTGGAGATCAGACCAGTTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCACTATGGCAAAGGTGAACAAAGCACTCCTTTGCAGAGACAGCATGCCTCCTTGCCTAGAGAGCGAGTACAAGTTCCCATGGATGAAGCTGGTCAAAATAATGACTTTGAAAGGCGAAGCACCGAGTCTGTCGCAACAACTCTTCATAGTCCTGATGGGACTGAAACTGCACAAAATGAACCAAACCAAGTTGGCTCCCGTAGCCTGTTGAAGAGTGCCAGCATCAGTGCCTCCAAGTGTATAGGTGACAACCAAAGTAAAGATCCAGAGGAGGAGCCTATTGAAGAGGTGAATGATGAGGAAGTAGATGGGTTGTCGGAGAAGCTTAATGCTCTTCGTGCTTAG 1830 0.4443 MGGGTTLVDGIRRLFQRRPSSAIKSSDDEASHNHNYHNADRMASSNNSHKFVRDLRAQLATLPIQEREEGEGVDDGLTIDDDFDISGLKIIKVPTRAYFEAASMDPTKKTSETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHSDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAETVSRIRNEKARRYLANMRKKQPVPLSQKFPRADPLALRLLERLLAFDPKDRPSAEEALSDPYFRGLANVEREPAAPQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLHEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGEQSTPLQRQHASLPRERVQVPMDEAGQNNDFERRSTESVATTLHSPDGTETAQNEPNQVGSRSLLKSASISASKCIGDNQSKDPEEEPIEEVNDEEVDGLSEKLNALRA 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2342 609 SUPERFAMILY Protein kinase-like (PK-like) 121 421 IPR011009 -
Acco02g2342 609 FunFam Mitogen-activated protein kinase 211 440 - -
Acco02g2342 609 MobiDBLite consensus disorder prediction 497 609 - -
Acco02g2342 609 FunFam Mitogen-activated protein kinase 114 219 - -
Acco02g2342 609 MobiDBLite consensus disorder prediction 18 47 - -
Acco02g2342 609 ProSitePatterns Protein kinases ATP-binding region signature. 131 155 IPR017441 GO:0005524
Acco02g2342 609 Gene3D Transferase(Phosphotransferase) domain 1 211 440 - -
Acco02g2342 609 Pfam Protein kinase domain 125 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2342 609 ProSitePatterns MAP kinase signature. 160 263 IPR003527 GO:0004707|GO:0005524|GO:0006468
Acco02g2342 609 SMART serkin_6 125 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2342 609 CDD STKc_TDY_MAPK 124 462 - -
Acco02g2342 609 MobiDBLite consensus disorder prediction 532 578 - -
Acco02g2342 609 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 119 464 - -
Acco02g2342 609 FunFam Mitogen-activated protein kinase 441 463 - -
Acco02g2342 609 MobiDBLite consensus disorder prediction 22 36 - -
Acco02g2342 609 Gene3D Phosphorylase Kinase; domain 1 141 463 - -
Acco02g2342 609 ProSiteProfiles Protein kinase domain profile. 125 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2342 Acco-ChrAcco02 20748845 20753857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2342 1 597 MAP Kinase Gene Family AT1G73670 69.421 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco02g2342 Pkinase 9.7e-68 CL0016