Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2334 ATGGATATTATTGGGGCCACCTTTTGTGTTGCTTTGCAAGGTAAAATACCAGGTTGCTTTGTTTCCATGAGAAGGCCTTCCTCCAAGAAACGATCTTGGTCCAAAGAAGAAGACCAGAAACTCATTGATTACGTTCAAAAATATGGGGAACGTTGCTGGCCTTCACTTCCTCCGGCCGCAGGGTTGCGTCGCTGTGGGAAAAGCTGTCGGTTGAGATGGTTAAATTATCTGAAGCCTGATATTAAAAGAGGAGACTTCGGAGAAGATGAAGAGGACTTGATCATCAGGCTTCATGCTCTTCTTGGCAACCGGTGGTCATTGATAGCGGGAAGATTACCAGGAAGAACGGATAACGAGGTGAAGAATTATTGGAACTGTCACATAAGAAAGAAGCTTATTCAGATGGGTCGTAATGATCCCAATAATAATAATGTTGGTGATCGCTTTATTAAAGGACCTACACTTAATAATAATAATATTGCAAACCAGAAGGATGATGATGAAGCTTCCAATGTAGTCAACAACTTGCGTAATAATATTACTACTGATAATAATCTTATCGACGATGGAGAAGAAGAAGAAGACGACGACAACCATCAAGTATCTGAGTCTTCAACAAGCAAGCCCAAGTTCAACCTCAACGCTTTTCCTGATCTGAATCTTGATCTCACACTCACTGCTACTTATCACTCTCATGATAATTAA 705 0.4085 MDIIGATFCVALQGKIPGCFVSMRRPSSKKRSWSKEEDQKLIDYVQKYGERCWPSLPPAAGLRRCGKSCRLRWLNYLKPDIKRGDFGEDEEDLIIRLHALLGNRWSLIAGRLPGRTDNEVKNYWNCHIRKKLIQMGRNDPNNNNVGDRFIKGPTLNNNNIANQKDDDEASNVVNNLRNNITTDNNLIDDGEEEEDDDNHQVSESSTSKPKFNLNAFPDLNLDLTLTATYHSHDN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2334 234 Gene3D - 85 151 - -
Acco02g2334 234 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Acco02g2334 234 CDD SANT 32 77 IPR001005 -
Acco02g2334 234 MobiDBLite consensus disorder prediction 180 213 - -
Acco02g2334 234 Pfam Myb-like DNA-binding domain 83 125 IPR001005 -
Acco02g2334 234 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Acco02g2334 234 Gene3D - 30 82 - -
Acco02g2334 234 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 27 204 - -
Acco02g2334 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Acco02g2334 234 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
Acco02g2334 234 SMART sant 82 130 IPR001005 -
Acco02g2334 234 SMART sant 29 79 IPR001005 -
Acco02g2334 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Acco02g2334 234 FunFam MYB transcription factor 84 143 - -
Acco02g2334 234 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Acco02g2334 234 FunFam MYB-related transcription factor 29 82 - -
Acco02g2334 234 Coils Coil 173 193 - -
Acco02g2334 234 CDD SANT 88 128 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2334 Acco-ChrAcco02 20623406 20625534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2334 14 225 MYB Transcription Factor Family AT4G09460 46.226 5.91e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g2334 Myb_DNA-binding 7.7e-14 CL0123