Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2330 ATGTCTCCTCGTGCCGATGAATACGACGAAGATGAGCTCTCCTCCAGCGAAGACGATGATGGCTTCAAGGAGGACATGGAATCCCTCAGACAAGCCTGCAAGCTTGCCGGGACCAACCCCGATAATCTTAAACCCACTTCCACCGTCACTCCCGACGATGAGAATGCAGACGTTGTGCTTCCGAAAGCACCTGACCCGCTGTTGGGCCCCAGAGATGCTCTCGTCCCCGTGTCAGACTCGGACGATGAGCAGAGTGACCTTCAGTATCTTCAAAGAGTACAAGAGCTTTACCAGACTTCGTCTCTTAAGCCATTGAAAGTTCTTCCGGCGCTTTCTTTGTCTGATGATGATGAAGATGATGCGGAACTCCTCCGGGTCATTATGAATCGCTTTGGCTCTTATGAAAAAGGTCCTGATGAAGATAATGTGGATAAAATGGGAGAGGGAGCTCATACCTTAGGTCTGTGCTCTGAGGTTGAATTTGATAACAGCGTGGCATCTGAGGGATTAGATCCTGGGGAAGCCTGCAAGTCATCCAAGTTACTGGACAAAAGATCAAAATTTCCTTTGTCTGCTCAGGTTTTCATTGATGCAATAAAAAAGAATAGATCTTTCCAGAGGTTACTTCGAAGTAAGTTGATTCAGATGGAAGCAAAAATTCAAGAAAACAGGCAGTTAATGGAAAGAGTCAAACTTCTCAAAGATTTTCAGGCTTCATGCATGAGAAGAACAGGGCATGCTATATCACTGAAAAAGGATCCCCGTGTCCTATTAATATCAACAAGAAAGTCTCCTGCTTCAAGTAACTCGAGGATTAATGATAAAAAGGTATCTCCAATGTGTTATGGCCCGGCTGAGAATGCTCATGTTGCTAAATTTAAGATGGTGTTAGAACGATCTTCATTTTCGTTGGATCGGAAAAAGTGGTCTAATGTTGAGAGGAAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAAAAGGTGCTTCAAATGTCAATAAATCAAGACAGTTCAGAGTGGTCACGTGGATATGCGAGGAACTTTGATACCATACTGGCATCTATTAAAGATCTTGAGATTTCACCCGAGAACATTAGAATGTTTCTGCTTGAATTCAATTGGGATCAGCTGGCTTCCAAGTATGTTGTTGGTCGTACCGGTGCAGAATGTGAAGCAAGGTGGTTAAATTGTGAAGATCCCTTGATCAATCATAGCCCATGGACCTGTGAGGAGGACAAGTTGCTGTTGCACTTAGTCCAAGAGATTGGCAATAGAAATTGGTTTAAAATTGCTGAATTACTAAGCACAAATAGGACCCCATTTCAATGCTTGGCACGATACCAAAGGAGTTTAAATCCTTCCGTGCTAAATAGTGAATGGACTGAGGATGAAGATGATCAACTTAGGCGTGCTGTTGCACATTTTGGTGTGAGCAATTGGCAGTCTGTAGCTTCTGTATTAGAACGAAGGACTGGAACTCAATGCTCTAATAGATGGAAGAAGTCTCTTTGTCCTGATAGGAAAGGGGGCTTTACAGTAGAAGAAGATGAGCGCTTAACAGTGGCCGTCCATCTCTTTGGACGGAAATGGAATCAGATATCTAAATTCATTCCCGGCCGAACTCAAGCTCAGTGTAGAGACAGATATGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGTTGGACTAAGGAAGAAGATTCAAGATTGAAAGAAGCAATTGCCAAACATGGATTCTGCTGGTCAAAGGTTGCTGCGGATGTGCCTCCGCGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTACTATTTCCTGACCAAGTTCCCATGCTTCAAGCAGCTAGAAAGATGCAAAAGTCAGCTCTAAACAATAACTTTGTTGATCGAGAGTCTGAACGTCCTGGCCTTTCTCTAAACGATTTTCTTCCCTTGGCGATGTTAGATCCACCATCCGATCCAGATGCCATGAACCTTGCTCAGGAGCGGAAGCGGAAGAGACCATCAAGCAATACTTCTAAGAACAAGAGGCCTCAAAAACGCACAAAAAAGGCTCAAAGTTGTCTTAAAAACAAGAGGCCTAAAAAACGCACAACAAAGTCTCAAAGTTGTCTCAGGAAAGTACAAGCTGACAAGGTTGAGCCTTGTAGTGAACATGGTATCCACAAGGCAAAGATTACTGAAGCACATTTGGAGGACAACTCTGTTGAAGCAGCGCATGATCATTCCCTGTTGGACTTGGTTGTGACAACAACGAATGGCCAAGGGGATTTTGGTATGCATGACAATATTGATAAGCTATTTGGGTCAAATCAAATGCAGAACGGTTTTAATGAATTACAAGAACAGAGCCATACTTGTATAACATCATGTCAGAATCCAAAAGCAGAGACAATAGGTGGGCATTGTGAGAAAATCTCTTCTATGGACTCATTGAAACGCCAATCTGGAACAAAGTCAACGCTATCTGCAAGTATATCTGATGGTGCAGCTGTAGGTAGCAAGGTTGCCAGAAATACTACTTCAGTGAAGGAAAGAAAGAAGAAAGGGAAACGTGACAGAATGGGTAGAACTGTTCAAACAGCAGAGGACCACATGGTTAAGAATAAAATGCCAAAACCTGTAAGCATATCTTCTATGCCGATTTTAGAAAGTCAGGATGAAGATAATGTAACTCTTGCTAGAGATTTATGCAATACATCAGACAAACGGTTTACAAATACTGACAAAATGACTCAGGCTGCTTCCTATCCTAGTTGTTCCATAAAAGAATCACACAGATCTCGTCGAGCTTCCAAACAAACTCATGATTGCTCGTCTTCTAGTTTGAAAAAGGGATGTGAATTGCCTTCTGAAGAAGTGCACAATGGTCATGACAGAAACCAAGAAATGGTGGTGGTGCAAGACAAGAATTTAGATAAAGATTGTATTGATGTTACACCTGGGGCTCTGCTTGTTCAGAACCATTCTTGCAATTTGAAGAACATGTCAACCGTTAAGGCTGATGACAATGAGAAGGCAATGTCAGGGCCAGTTGATGAGCAGACTAAGTTTTTGGATGGTGCGACAGAGCCCAAAAACATCATTGTTGAAGAGGATGAAGCTACTGAAGTCACCCTTGCTTCCTTCCTGAAAAAGAAGAAAAGCAAAGGCAAGGCAATGGCAGAGCCAGTTGATGAGCAGGCTATGGTTTCGAATGGTCTGACAGAAACCAAAAGCACGAGTGTTGGAGATGATGGGTCTCTTGATGTTACTCTTGCTTCCTTGCTGAGAAAGAAAGGAAGGGGACGGCTGGCTGTTACGTTGGCTTGTGCCAAGCCGGTTTTTGATCAAATACTGCCTCATGTTTTTCTTTTTCACAAAAAGCTGGAAGTTGCTGTACGGGAATTCTTAACAAAAGTTGTGGAATACTCACCTAGCCACACAAACAGAGATTTTGAAAGATTAAGAAGCATGCTTGGAGCTGGTAAAATGGAGTATACATGGATACAAACCATTCTCTATTGGGTGTTGGGAGTCTCATATCTAGCAAAGTTTCTACACCAGACCTTTATGTGGGAAGGAACCCAGAACATGGTTTTATACAGAGTCTATTGTGATACTGAAACAGAAAATCCAAGTTTTGCATGCCACATCACCTCAGCAGATGAACACGGGGTAATGAAGAAAAATCTTATAAATAATAAGCAAAGCAACTGTTTAAATCAAAATAAAAGGCCGCCTCAAAGAGGCTATTATCTTCAACATACAAATTGA 3756 0.4241 MSPRADEYDEDELSSSEDDDGFKEDMESLRQACKLAGTNPDNLKPTSTVTPDDENADVVLPKAPDPLLGPRDALVPVSDSDDEQSDLQYLQRVQELYQTSSLKPLKVLPALSLSDDDEDDAELLRVIMNRFGSYEKGPDEDNVDKMGEGAHTLGLCSEVEFDNSVASEGLDPGEACKSSKLLDKRSKFPLSAQVFIDAIKKNRSFQRLLRSKLIQMEAKIQENRQLMERVKLLKDFQASCMRRTGHAISLKKDPRVLLISTRKSPASSNSRINDKKVSPMCYGPAENAHVAKFKMVLERSSFSLDRKKWSNVERKNLAKGIKQQFQEKVLQMSINQDSSEWSRGYARNFDTILASIKDLEISPENIRMFLLEFNWDQLASKYVVGRTGAECEARWLNCEDPLINHSPWTCEEDKLLLHLVQEIGNRNWFKIAELLSTNRTPFQCLARYQRSLNPSVLNSEWTEDEDDQLRRAVAHFGVSNWQSVASVLERRTGTQCSNRWKKSLCPDRKGGFTVEEDERLTVAVHLFGRKWNQISKFIPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKEAIAKHGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMQKSALNNNFVDRESERPGLSLNDFLPLAMLDPPSDPDAMNLAQERKRKRPSSNTSKNKRPQKRTKKAQSCLKNKRPKKRTTKSQSCLRKVQADKVEPCSEHGIHKAKITEAHLEDNSVEAAHDHSLLDLVVTTTNGQGDFGMHDNIDKLFGSNQMQNGFNELQEQSHTCITSCQNPKAETIGGHCEKISSMDSLKRQSGTKSTLSASISDGAAVGSKVARNTTSVKERKKKGKRDRMGRTVQTAEDHMVKNKMPKPVSISSMPILESQDEDNVTLARDLCNTSDKRFTNTDKMTQAASYPSCSIKESHRSRRASKQTHDCSSSSLKKGCELPSEEVHNGHDRNQEMVVVQDKNLDKDCIDVTPGALLVQNHSCNLKNMSTVKADDNEKAMSGPVDEQTKFLDGATEPKNIIVEEDEATEVTLASFLKKKKSKGKAMAEPVDEQAMVSNGLTETKSTSVGDDGSLDVTLASLLRKKGRGRLAVTLACAKPVFDQILPHVFLFHKKLEVAVREFLTKVVEYSPSHTNRDFERLRSMLGAGKMEYTWIQTILYWVLGVSYLAKFLHQTFMWEGTQNMVLYRVYCDTETENPSFACHITSADEHGVMKKNLINNKQSNCLNQNKRPPQRGYYLQHTN 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2330 1251 SUPERFAMILY Homeodomain-like 534 608 IPR009057 -
Acco02g2330 1251 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 14 1073 - -
Acco02g2330 1251 Gene3D - 559 607 - -
Acco02g2330 1251 Gene3D - 509 558 - -
Acco02g2330 1251 Pfam Myb-like DNA-binding domain 512 571 - -
Acco02g2330 1251 Pfam Myb-like DNA-binding domain 408 467 - -
Acco02g2330 1251 ProSiteProfiles Myb-like domain profile. 555 605 IPR001005 -
Acco02g2330 1251 MobiDBLite consensus disorder prediction 669 702 - -
Acco02g2330 1251 Gene3D - 459 508 - -
Acco02g2330 1251 Gene3D - 406 456 - -
Acco02g2330 1251 CDD SANT 563 605 IPR001005 -
Acco02g2330 1251 SUPERFAMILY Homeodomain-like 456 550 IPR009057 -
Acco02g2330 1251 CDD SANT 512 554 IPR001005 -
Acco02g2330 1251 ProSiteProfiles Myb-like domain profile. 453 504 IPR001005 -
Acco02g2330 1251 ProSiteProfiles Myb-like domain profile. 400 452 IPR001005 -
Acco02g2330 1251 ProSiteProfiles Myb-like domain profile. 508 554 IPR001005 -
Acco02g2330 1251 MobiDBLite consensus disorder prediction 833 858 - -
Acco02g2330 1251 MobiDBLite consensus disorder prediction 1 70 - -
Acco02g2330 1251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 453 508 IPR017930 -
Acco02g2330 1251 SMART sant 559 607 IPR001005 -
Acco02g2330 1251 SMART sant 404 454 IPR001005 -
Acco02g2330 1251 SMART sant 305 401 IPR001005 -
Acco02g2330 1251 SMART sant 508 556 IPR001005 -
Acco02g2330 1251 SMART sant 457 506 IPR001005 -
Acco02g2330 1251 CDD SANT 460 504 IPR001005 -
Acco02g2330 1251 SUPERFAMILY Homeodomain-like 380 449 IPR009057 -
Acco02g2330 1251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 509 549 IPR017930 -
Acco02g2330 1251 MobiDBLite consensus disorder prediction 642 708 - -
Acco02g2330 1251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 555 609 IPR017930 -
Acco02g2330 1251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 400 452 IPR017930 -
Acco02g2330 1251 MobiDBLite consensus disorder prediction 909 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2330 Acco-ChrAcco02 20553392 20565842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2330 186 688 MYB-Related Transcription Factor Family AT3G18100 52.242 2.85e-173 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g2330 Myb_DNA-bind_6 1.9e-14 CL0123