Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2311 ATGAGCGCAAGCTCGCAGTCTCTGTCTGCCAGTGGAAATGGAAGTGTAAATGTGGAGCCTCAGGACCCAGAATCAAACCCTAATCACAAGCGGGAGGCTTATTCAGAAACTAATGATCTGACAGCTAAGAAATCGAGAACTGAAGCTTCGACTGTGCCTGATGCTTCCGGCAGTGAAGAAGAAGGGAACTCAGGAGCTGTTTCAGGTCAAGAGAATGGCAAGGAACTGAAAGAAAGGAACTCAGGTGCTGTTTCAGGTCAATATAATGCCAAGGAGCTAACATTCGAGATTGAGGCGGACGCAGCTGAGGATAAGGGGTCTAGGCATTCAATGGAAGATGCCTGGGTAGTGCTTTTGGACGCCAGTTTAGATCACCCTGGAAATCTGAGATGTGCACACTTTGCTATCTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAAATATTTGCATCAAAATGTTCTTTCAACAGGATTACCACGTGAGTTGTTAGACGTAAAGGTAGCTAAAAGAGCAATACTTGAAGGTTTTCGCAAAACCGATGAGTCCCTTCTTCAAGAAAGTGCTTCAGGGGGATGGCAAGATGGTGCTACGGCTGTATGCGTTTGGGTATTGGGACAAAAAGTTTTTGTTGCAAATATAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAGCTATAACCGATGGATCCCTAAATCATTCTGACGGAGTCCATGTATTAAAGGCCATAGTTTTGACAAGGGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGTATTCACAAGGCTGGTGGTGTTGTGAGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCCCCAGTTCAAGAAGGTGGGTGTTAGTGCAACCCCAGATATCCATTCTTTTGACCTTACTGATAGAGAGCATTTTATTATCCTTGGCTGTGATGGCCTATGGGGGGTATTTGGTCCCAGTGATGCAGTTGATTTTGTTCAGAAACTATTGAGTGAGGGGTTGCCTGTCACAACTGTGACCCGCCATCTTGTAAGAGAAGCTGTACGTGAGCGGCACTGTAAGGATAATTGCACTGCCATTGTTATTGTATTCAAGCGTTAG 1125 0.4604 MSASSQSLSASGNGSVNVEPQDPESNPNHKREAYSETNDLTAKKSRTEASTVPDASGSEEEGNSGAVSGQENGKELKERNSGAVSGQYNAKELTFEIEADAAEDKGSRHSMEDAWVVLLDASLDHPGNLRCAHFAIYDGHGGRLAAEYAQKYLHQNVLSTGLPRELLDVKVAKRAILEGFRKTDESLLQESASGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSAITDGSLNHSDGVHVLKAIVLTREHKAIYPQERARIHKAGGVVSSNGRLQGRLEVSRAFGDPQFKKVGVSATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVDFVQKLLSEGLPVTTVTRHLVREAVRERHCKDNCTAIVIVFKR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2311 374 MobiDBLite consensus disorder prediction 1 85 - -
Acco02g2311 374 ProSiteProfiles PPM-type phosphatase domain profile. 98 372 IPR001932 -
Acco02g2311 374 Pfam Protein phosphatase 2C 102 359 IPR001932 -
Acco02g2311 374 SMART PP2C_4 94 370 IPR001932 -
Acco02g2311 374 FunFam Probable protein phosphatase 2C 67 86 374 - -
Acco02g2311 374 CDD PP2Cc 102 372 IPR001932 -
Acco02g2311 374 PANTHER PROTEIN PHOSPHATASE 2C 54 370 IPR015655 GO:0004722|GO:0006470
Acco02g2311 374 MobiDBLite consensus disorder prediction 44 70 - -
Acco02g2311 374 MobiDBLite consensus disorder prediction 1 23 - -
Acco02g2311 374 Gene3D - 82 374 IPR036457 -
Acco02g2311 374 MobiDBLite consensus disorder prediction 24 43 - -
Acco02g2311 374 SUPERFAMILY PP2C-like 97 373 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2311 Acco-ChrAcco02 20283472 20289628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2311 27 324 PP2C-type Phosphatase Gene Family AT1G18030 67.893 1.81e-138 395