Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2278 ATGACCAATTCTTTCGAAGTAGAATTGGGACAAGGTGGTTATGGTGCAGTATACAAGGGAAAATTACTAGATGGACGCTTTGTTGCTGTAAAGTTATTGAAGCTATCCAAAGGCAATGGAGAAGAATTTATCAATGAGGTTGCTAGCATCAGTGGAACTTCCCACGTCAATGTTGTGACCCTCCTTGGATTTTGTTTGGAAGGCCATAAAAAGGCTCTCATATATGAGTTTATGCCCAATGGGTCTCTTGACATGTTCATTTACAAGACAAGCCATGTTGATTACATGGTGGAAGGGCAAAAGAACATGAATGCTAAAAGTAATTGCTCAACTGAGAATTATTTTCCTGACTGGATCTATGATAAACTTGAGAAAGACAGCACTTTGGGAAGTGATGGAGTCAACAACATTGAGGAAAATGATATTGCAAAAAGAATGATCATTGTGGGTCTGTGGTGCATTCAAACATTTCCAATTCAAAGACCTACAATAAGTAGAGTGATTGAAATGTTAGAAGGAAGTTTGAATTCACTAGAAATGCCTCCAAAACCTGTCCTATCTTCGCCTCCAAGATCAGAACTAGAGTACTCCTCCACTACCAATACCACCACATAG 615 0.3902 MTNSFEVELGQGGYGAVYKGKLLDGRFVAVKLLKLSKGNGEEFINEVASISGTSHVNVVTLLGFCLEGHKKALIYEFMPNGSLDMFIYKTSHVDYMVEGQKNMNAKSNCSTENYFPDWIYDKLEKDSTLGSDGVNNIEENDIAKRMIIVGLWCIQTFPIQRPTISRVIEMLEGSLNSLEMPPKPVLSSPPRSELEYSSTTNTTT 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2278 204 ProSiteProfiles Protein kinase domain profile. 3 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2278 204 MobiDBLite consensus disorder prediction 179 204 - -
Acco02g2278 204 PANTHER RUST RESISTANCE KINASE LR10-RELATED 96 191 IPR045874 GO:0004672
Acco02g2278 204 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Acco02g2278 204 Pfam Protein tyrosine and serine/threonine kinase 6 95 IPR001245 GO:0004672|GO:0006468
Acco02g2278 204 SUPERFAMILY Protein kinase-like (PK-like) 8 92 IPR011009 -
Acco02g2278 204 Gene3D Transferase(Phosphotransferase) domain 1 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2278 Acco-ChrAcco02 19787571 19788500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2278 1 87 Receptor kinase-like Gene Family AT5G38280 73.864 2.50e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco02g2278 PK_Tyr_Ser-Thr 4.9e-15 CL0016