Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2272 ATGATGAAACTCGCATCGTCTTTTCTTCCTCTGTTTTTCTTCTACATCCACATTGCTTCTGCTAGCAATTCCATTTCATCTTCCTCTGTCTGTCCCACCAATAGCTGTGCCGATGGGCTTCAAATCAGATACCCTTTTTGGCTCTCGCAAGGTTCCCCTCCTGACCAGTACTGTGGTTACCAAGTATTCGGCCTTATCTGCGGTCATGGCTACCCTATCTTCTCAATACTTGGGTTATATTATTTTGTCAAAAATATTGACTATGATAATCACACCCTTCACCTTCTTGATTATGATACTTACAACCAGACATGTCCAAGGGCACTTCACAGTGTTCCATTGGGAAGCTTACCACTTTCTCACTCCCCTTTGAATTTGAACCTTAACCTTTATTACAATTGCAGTTCTCACCCCTCTGGTGTGGCGCCCATAAGGTGTTTGACATCTGGTGTGAATGAGTCCTTTGTGTTTGTGGAGGGGAACGAGACTGGAGGTTTTGATTGGTCCAAGAATTGTGGAGAGAGTGTTATGGTGACGGTTATGAAGGACCGAGTTACTAGTGGAGGGTTGATGAATGAGTATAAAGAGGCCATGAATGAAGGGTTTGTGCTTGACTGGCAAACGGCCGAGAGTTGTGTTGAGTGTGAGGCTTCTGATGGGTTTTGTGGCTACAGTAATTTAGAAAAGGAGGTATTGTGCTTCTGTAACGATGGAAACATACAAAGCAATAGCTGCTCAGGGAAACACAGAGCCCATTTGCCAAAGCTTATTATTGGTTTAATAGCTGCAGGAATGGGAGCTCTGTTAATGTGCATCATAATCTTCTTCACAAGACGAAAAATATCATTGATCATCTCGACAGGCTATTGGAAGACTAAAAAGAAAGATGGAAACATTGAGTCCTTCATCAGAAATAACGGGCCTCTACCTATAAAAAGATATACATTTTCAGAAATCAAGAAAATGACCAACTCTTTTGAAGTCAAATTGGGAGAAGGAGGTTATGGTAATGTATTCAAAGGAAACATAGCAAACAACTATCCTGTGGCTGTGAAGGTATTGAATGCGTCCAAAGGGAATGATGCAGAGTTTATCAATGAGGTTGTGAGCATCAGTAGGACTTCTCATGTCAATATTGTCACCCTCCTTGGTTTTTGTCTTGACGGCAGCAAAAAAGCACTCATATATGAACTTATGCCCAATGGTTCACTTGAAAAGTTCATATGCAAGAAAGATTTAGAGCCAAATTATCCACCCTTGAGTTGTGAAAAACTACTCCAAATTGCTGAAGGGATAGCCAAAGGACTTGAGTATTTGCATAGTGGTTGCAGTACTCGAATCTTGCATTTTGACATAAAACCTAGCAATATCCTTTTGGATAAAAACTTTTGCCCAAAGATATCAGATTTTGGGTTGGCTAAACTCTGCTCTAAAACACATAGTATTGTCTCAATGCTGGATGCAAGAGGAACGTTTGGATATATTGCTCCGGAAGTATGGAATAGAAACTTTGGAGGAGTTTCCTACAAGTCAGATGTGTACAGCTATGGAATGTTGATTTTGGAAATGGTTGGAGGAACACAAAACATTGAAAGCAAAATGAGTGATTCAAGTGATATGTATTTGCCTCATCTGATATATAAGCAAATTGAGTCAGACAAAAATATAACAGAAGATGATGATATGAGCAGGGAGGAAAGTGAAATTGCAAAGAAGATGATCATAGTGGGATTATGGTGCATTCAGCCCATGCCATCAGATAGGCCTCCCATGAATAGAGTGATTGAGATGTTGGAAGGGAGCTTGGAACAACTCTCGATACCATCAAAGCCTCATATGTTTCCACCTATGATTCCAACAAATGGAGAGGAAATTTGTGCTACAAATGGTGTTCTTTCGTTTTCTGCTGATTATCAATGTGGTAGATAG 1929 0.4038 MMKLASSFLPLFFFYIHIASASNSISSSSVCPTNSCADGLQIRYPFWLSQGSPPDQYCGYQVFGLICGHGYPIFSILGLYYFVKNIDYDNHTLHLLDYDTYNQTCPRALHSVPLGSLPLSHSPLNLNLNLYYNCSSHPSGVAPIRCLTSGVNESFVFVEGNETGGFDWSKNCGESVMVTVMKDRVTSGGLMNEYKEAMNEGFVLDWQTAESCVECEASDGFCGYSNLEKEVLCFCNDGNIQSNSCSGKHRAHLPKLIIGLIAAGMGALLMCIIIFFTRRKISLIISTGYWKTKKKDGNIESFIRNNGPLPIKRYTFSEIKKMTNSFEVKLGEGGYGNVFKGNIANNYPVAVKVLNASKGNDAEFINEVVSISRTSHVNIVTLLGFCLDGSKKALIYELMPNGSLEKFICKKDLEPNYPPLSCEKLLQIAEGIAKGLEYLHSGCSTRILHFDIKPSNILLDKNFCPKISDFGLAKLCSKTHSIVSMLDARGTFGYIAPEVWNRNFGGVSYKSDVYSYGMLILEMVGGTQNIESKMSDSSDMYLPHLIYKQIESDKNITEDDDMSREESEIAKKMIIVGLWCIQPMPSDRPPMNRVIEMLEGSLEQLSIPSKPHMFPPMIPTNGEEICATNGVLSFSADYQCGR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2272 642 PANTHER RUST RESISTANCE KINASE LR10-RELATED 291 615 IPR045874 GO:0004672
Acco02g2272 642 FunFam PR5-like receptor kinase 399 610 - -
Acco02g2272 642 Gene3D Transferase(Phosphotransferase) domain 1 399 610 - -
Acco02g2272 642 Pfam Protein tyrosine and serine/threonine kinase 327 598 IPR001245 GO:0004672|GO:0006468
Acco02g2272 642 Pfam Wall-associated receptor kinase galacturonan-binding 31 97 IPR025287 GO:0030247
Acco02g2272 642 SUPERFAMILY Protein kinase-like (PK-like) 301 599 IPR011009 -
Acco02g2272 642 Pfam Wall-associated receptor kinase C-terminal 150 238 IPR032872 -
Acco02g2272 642 SMART serkin_6 324 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2272 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Acco02g2272 642 ProSiteProfiles Protein kinase domain profile. 324 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2272 642 Gene3D Phosphorylase Kinase; domain 1 303 398 - -
Acco02g2272 642 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2272 Acco-ChrAcco02 19682431 19685125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2272 32 613 Receptor kinase-like Gene Family AT5G38260 39.934 4.23e-136 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco02g2272 PK_Tyr_Ser-Thr 2.5e-45 CL0016