Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2253 ATGACTACGGAAGATGAATGGAAGCTGTCTTAAGCAGTCATGTCTACTTCAAAGAGCGAGAGTAGCTGTAGTGAAGATGATAATGAGCTTAGGAGAGGACCTTGGACTCTTGAAGAGGATACTCTGTTAACTCAGTACATCTCTGCTAATGGGGAAGGAAGATGGAATTTGCTGGCACAACGTTCAGGGTTGAAGAGGACAGGAAAGAGTTGCAGATTAAGATGGCTTAATTATCTGAACCCACAAGTAAGGCGAGGAAATTTAACCCCAGAAGAGCAGATTTTGATCCTTGAACTCCACTCAAAGTGGGGAAACAGGTGGTCAAAGATTGCACAACATCTTCCAGGGAGGACAGACAATGAAATCAAGAACTACTGGAGAACTCGGATTCAGAAACAAGCGAGGCACTTGAATATCGACACAGACAGCACAGAGTTTAAGGAAATCGTCAGGCGGTTTTGGATGCCGAAGCTGATGCAGAAAGCAAGAGAAACATCGGCTTCTGCTAATCTTCCATCTGCCATGTCAATCCAAAACGAGATGATTCCTTTGCCCACTGACAATGTTTCTCAGCGTTCAGAAATAGGGACAGTACCAACACAGATGATTCCTTGGCAGGGACCCAGTGTGATGAATGAAACAGTAGTTCAAAACTGTTCATGCTTGTCCACTTCTTCCTCAGAATCATCAAACATCCCAGAACTGTCTCAGTTTCAGGCCTTAGATAACAGTGACATGAGCTCATTTATGTATGATGGGTACTACGTTAACAGCAATACCTACGGCATGGAAACATTCAGTCCGGGAACAACAGTGACAACATCTGAGGCTGCTATGGCAGGAAACTGGATGAACAACGATGTTTCATCATGCAGCATGTGGGGCATGGATGAATTGTGGCAGTTCAAAAACATGCAAAATTAA 924 0.4394 MTTEDEWKLSXAVMSTSKSESSCSEDDNELRRGPWTLEEDTLLTQYISANGEGRWNLLAQRSGLKRTGKSCRLRWLNYLNPQVRRGNLTPEEQILILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLNIDTDSTEFKEIVRRFWMPKLMQKARETSASANLPSAMSIQNEMIPLPTDNVSQRSEIGTVPTQMIPWQGPSVMNETVVQNCSCLSTSSSESSNIPELSQFQALDNSDMSSFMYDGYYVNSNTYGMETFSPGTTVTTSEAAMAGNWMNNDVSSCSMWGMDELWQFKNMQN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2253 307 Pfam Myb-like DNA-binding domain 85 128 IPR001005 -
Acco02g2253 307 Pfam Myb-like DNA-binding domain 32 79 IPR001005 -
Acco02g2253 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Acco02g2253 307 SUPERFAMILY Homeodomain-like 30 126 IPR009057 -
Acco02g2253 307 CDD SANT 89 128 IPR001005 -
Acco02g2253 307 SMART sant 31 81 IPR001005 -
Acco02g2253 307 SMART sant 84 132 IPR001005 -
Acco02g2253 307 Gene3D - 32 84 - -
Acco02g2253 307 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 26 221 IPR044676 GO:0003700|GO:0006355|GO:0043565
Acco02g2253 307 FunFam MYB transcription factor 88 130 - -
Acco02g2253 307 CDD SANT 34 79 IPR001005 -
Acco02g2253 307 ProSiteProfiles Myb-like domain profile. 27 79 IPR001005 -
Acco02g2253 307 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Acco02g2253 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 79 IPR017930 -
Acco02g2253 307 Gene3D - 88 131 - -
Acco02g2253 307 FunFam Myb transcription factor 32 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2253 Acco-ChrAcco02 19467418 19468822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2253 27 303 MYB Transcription Factor Family AT1G68320 47.350 1.94e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g2253 Myb_DNA-binding 3.3e-14 CL0123