Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2252 ATGGCTGAATTCACAACAGATTTTCAAAGCCTTAGACCCTCCTCTTTGCCTTTCTTAGACTTTGATCCAAACTTGGAACTTATAAACCAGTTCACAGGCATGTTGAGCCCATCACTTGTCCTGATGGAAAACTCTAATCTCAATGTCCAGAGCTTGGTTCCTTTCTCTCATCAAGATCCTTCTGATGATTTTGGAGGAAACTTGGAGGGAAATTTCCCTGTTTTACCAGCAAAAAGTGAAATCCAGGATAGTCAAAAGAGGAAAGCCATGGATGTTATTACTGAGACCAGTTCTGTAAACCCAACTCTTGCAGCTTCTGAGAGTGGAAGAAGCAAGATCATTAATAGTTCTGGAAGAGGTAAGAGAGCTAAAAGCAACATAACAGAAGAAGGTAAACCAGAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCAGAAGGGGAAAAATCAATGAAAAAATAAGACGCTTGCAGACCATTGTCCCAGGATGTTACAAGGCCATGGGTATGGCAGTGATGTTGGACGAGATTATAAACTATGTCCAGTCCTTGCAGCATCAGGTGGAGTTTCTATCTATGAAGCTGACTGCTGCAAGTACCTTCTATGATTTCAATTCAGAGACAGATGCCATTGAAACAGTGCAGAGAGCAAGGGCGTTCAAGGCAAAAGGATTAACCTCAAGAAATGGAAGTGAAGAAGGATATGGTGGAGGAGTTTCTAGCTTTCATCATCCAACTTGGCCTCTCTGA 783 0.4253 MAEFTTDFQSLRPSSLPFLDFDPNLELINQFTGMLSPSLVLMENSNLNVQSLVPFSHQDPSDDFGGNLEGNFPVLPAKSEIQDSQKRKAMDVITETSSVNPTLAASESGRSKIINSSGRGKRAKSNITEEGKPEEVVHVRARRGQATDSHSLAERVRRGKINEKIRRLQTIVPGCYKAMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSETDAIETVQRARAFKAKGLTSRNGSEEGYGGGVSSFHHPTWPL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2252 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 213 IPR036638 GO:0046983
Acco02g2252 260 CDD bHLH_AtBPE_like 135 220 - -
Acco02g2252 260 Gene3D - 142 213 IPR036638 GO:0046983
Acco02g2252 260 Pfam Helix-loop-helix DNA-binding domain 149 196 IPR011598 GO:0046983
Acco02g2252 260 SMART finulus 151 201 IPR011598 GO:0046983
Acco02g2252 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 195 IPR011598 GO:0046983
Acco02g2252 260 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 84 219 IPR024097 GO:0006355
Acco02g2252 260 MobiDBLite consensus disorder prediction 105 122 - -
Acco02g2252 260 MobiDBLite consensus disorder prediction 105 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2252 Acco-ChrAcco02 19437787 19439106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2252 55 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 54.148 5.13e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco02g2252 HLH 7e-06 No_clan