Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2242 ATGCGCCTCAGTTGCAACGGTTGCCGGGTCCTCCGTAAAGGTTGTACTGCCGATTGCCCCATTCGTCCCTGCCTCCTCTGGATTCCCTCTCCTCAATCCCAATCCAACGCTACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTAATCAACCTCCTCAATTCCGGTGCCCCTCACCTCCGACCAGGGATTTTTAAGTCCTTGCTCTACGAAGCTTGTGGGCGGATTGTCAATCCCATTTTTGGTTCAGCTGGCTTACTCTCTTCTGGAAGCTGGCATCTCTGTCAAGTCGCCGTGGAAGCTGTTCTCAGAGGCGAACCGATCACGCAGGTTTCGCCTGAATCGGCTTTTGACGGTGTTAGCCCGCTCCTGAAGTCGTGTGATATTCGACATGTGGGTGAAAAGGGAAATTCGTGCTCTTCTGATAAGCCCCACAAGGTGAGAAAAGGGAGCCAATTTAAACGCTCCGGCGCTAAGCAGAAGAAGCCTGTGGGAGCGGAGCTGATGGCTCATTCGGGGAGCGAGTTGGATGGTTCGGGGATGAGCGAGCATAGAATAGGAAGTCCCGGTGGTGAAGCTGATAGCAGTACCGTCGAGACAGCAGAGGGTTGGGCGGCGCCGGCGAAGAGCGACGAGAGAAGCGAAGCTGAAGCAGAGGATGGAGAGTTAGAGCTGGATTTGACCATGTGGTGGGGTCAACAAGCAAAGGTGAATAGAGAAGTCAACGGTTCTGATGCTAACACGTATAAGTTAAAGCTTGGCTCTGATCATTCTAATTAG 783 0.5377 MRLSCNGCRVLRKGCTADCPIRPCLLWIPSPQSQSNATLFLAKFYGRAGLINLLNSGAPHLRPGIFKSLLYEACGRIVNPIFGSAGLLSSGSWHLCQVAVEAVLRGEPITQVSPESAFDGVSPLLKSCDIRHVGEKGNSCSSDKPHKVRKGSQFKRSGAKQKKPVGAELMAHSGSELDGSGMSEHRIGSPGGEADSSTVETAEGWAAPAKSDERSEAEAEDGELELDLTMWWGQQAKVNREVNGSDANTYKLKLGSDHSN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2242 260 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Acco02g2242 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 228 - -
Acco02g2242 260 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Acco02g2242 260 MobiDBLite consensus disorder prediction 135 222 - -
Acco02g2242 260 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2242 Acco-ChrAcco02 19279379 19280275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2242 1 230 AS2 family AT3G02550 48.707 1.05e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco02g2242 LOB 2.9e-22 No_clan