Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2207 ATGGATTTAGAAGAAAAGTTCCTTGCTAAAGTTTCCGGTCTTCAAAGCCTTTCTTCCAGCGTGCAAAGCACACCAGAGAAAAATGGCCATTCAGATGATGCCTCAGGAAGTCCAGAACTCCTGCAGGAGTTCCTTAAATCTGGTCCAAAAAAGGAACTTCTACGGACATGCTTTGATAAAGACAAAAAGAACACTTCAGTAAAAGGCAGGATGACTGAAAATAAGTCAAGTAAGACAATCAAGAAACAGGACTCGAAAAAGGTTTCTAGCAGTAACCAGTCTTCTAAGAAGCAACATAGAAAGGGAGAAAATCCCACAAGACTCCTGCCAACGCCTGACCAGTCTTCAGATTTTGGGCATGCAAACTCCTGGATCTGTAAGAATTCTGCTTGTAGAGCTGTTCTGTCTACAGACGACACATTTTGTAGAAGGTGTTCTTGCTGCATCTGTCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTCTGCACATCTGAATCTGCTCAGGGTGATTCCTGTGGGTTATCTTGCCATATCGAGTGTGCCATCCAACATGAAAAAGTTGGAGTTGTTGATCATGGGCAATTGATGCAACTAGATGGTGGCTATTGTTGTGCAACTTGTGGTAAAGTTACAGGGATACTCGGATGTTGGAGAAAGCAGTTAAGTATAGCAAAAGATGCTCGACGTGTAGATGTACTCTGTTATAGAATATATTTGAGCTACAGGCTTCTAGATGGGACTTCGAGGTTTAAAGAACTCCATGAGATTGTGCAAGAGGCGAAGGCTAAATTGGAAACAGAAGTTGGTCCGGTTAATGGTGTTTCTGCCAAGATGGCAAGGGGCATTGTCAGCAGACTCTCTGTTGCCAGTGATGTGCAGAAATTGTGCTCCCTTGCTGTTGAGAAGGCTGATGAGTGGCTGGCCTCTGTTTCCAATGTAAATCCAGATTCCAGAGAGGGTTCACTCCCTGCTGCCTGCAAGTTTATTTTTGAAGAGGTGACAGCTTCGTCAGTCAAAATCATTTTGATTGAAATGTCTAATTCATCTTCTGAGGACATCAAAGGTTTCAAGCTCTGGTATTACAGGAGTGGCGAGGAATTGCCCACCAGAGACCCTGTTTGTTTTTTCCCGAAATCTCAGAGGAGGATTCTGATAACAAACCTCCAACCTTGCACAGAATATACATTTCGGATTGTGTCTTACACAGATACATGTGATCGGGGTCATTCTGAGGCCAAGTGTTTCACTAAGAGCATTGAAATAATTAGAAAAAATCCTTCTTCGTTAGCTCCTTTGAATCATAAAGAGAACCTTAAAACTGGAGGAACTTCTTCTGACCCCAAAAGAGAGTCCAATCCAACCACGGAAGACTCTGGATTTAAAGTTCGAGACCTTGGAAAAGTTCTGCGCCTCGCTTGGGCTCAAGAACAATGTTGCTTTGAGGGGTTTTGCTGTGCTGATGTGAAAAATTGCTGTGGAGGAAGTGAAATGGTCAGGCCTAAATATTCAGAAGAGACATTGCCTAAAGTTTCAAGGGGCCTTGATCTAAATGTAGTTTCGGTTCCTGATTTAAATGAAGAATTAACACCACCTTTTGAGTCTTCTAGGGATGAAGATAACGGTTGCACCTTGCAGCAGGCTATTGGGGCTGATGATGATGCTGCTTCTCATGATGTTGAGAAGATTGGCATAGCAAGATCCCATGGCAGTGGCGACTCACAAACATGGGCCCACAGGCCTGCCGGAGAAGTTCCGGCCGTTGACTCACGTGTAGATGCTGCAAGCAGGAAAAGAGCGGCAAGCACGAATGAAGAGACTCATGATTGTGACAGCACTTTGATAAATGGATCTCCTTTACGCATTTCTGATGCATCGTGTTCCTTGGATGAGAACTTTGAGTATTGTGTGAAAGTAATTCGCTGGCTAGAATGTGAGGGCCACATTAAGCAGGAATTTCGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCAACAGAACAGGAACGTAGGGTGGTCAATACCTATATTCAAACTCTGATAGATGACCCAAGTAGTTTGGCTGGACAACTGGTTGACTCTTTTTCTGATATTATATCTAACAAGAGGCCAAGAAATGGATTCTGTGGTAAGCTTTGGCATTAA 2151 0.4324 MDLEEKFLAKVSGLQSLSSSVQSTPEKNGHSDDASGSPELLQEFLKSGPKKELLRTCFDKDKKNTSVKGRMTENKSSKTIKKQDSKKVSSSNQSSKKQHRKGENPTRLLPTPDQSSDFGHANSWICKNSACRAVLSTDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESAQGDSCGLSCHIECAIQHEKVGVVDHGQLMQLDGGYCCATCGKVTGILGCWRKQLSIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEIVQEAKAKLETEVGPVNGVSAKMARGIVSRLSVASDVQKLCSLAVEKADEWLASVSNVNPDSREGSLPAACKFIFEEVTASSVKIILIEMSNSSSEDIKGFKLWYYRSGEELPTRDPVCFFPKSQRRILITNLQPCTEYTFRIVSYTDTCDRGHSEAKCFTKSIEIIRKNPSSLAPLNHKENLKTGGTSSDPKRESNPTTEDSGFKVRDLGKVLRLAWAQEQCCFEGFCCADVKNCCGGSEMVRPKYSEETLPKVSRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAIGADDDAASHDVEKIGIARSHGSGDSQTWAHRPAGEVPAVDSRVDAASRKRAASTNEETHDCDSTLINGSPLRISDASCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTYIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFCGKLWH 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2207 716 CDD FN3 330 406 IPR003961 GO:0005515
Acco02g2207 716 MobiDBLite consensus disorder prediction 11 41 - -
Acco02g2207 716 MobiDBLite consensus disorder prediction 593 608 - -
Acco02g2207 716 Gene3D Immunoglobulins 310 416 IPR013783 -
Acco02g2207 716 MobiDBLite consensus disorder prediction 433 462 - -
Acco02g2207 716 MobiDBLite consensus disorder prediction 62 115 - -
Acco02g2207 716 PANTHER VIN3-LIKE PROTEIN 2-RELATED 16 716 IPR044514 GO:0010048|GO:0040029
Acco02g2207 716 MobiDBLite consensus disorder prediction 62 85 - -
Acco02g2207 716 MobiDBLite consensus disorder prediction 569 612 - -
Acco02g2207 716 ProSiteProfiles Fibronectin type-III domain profile. 325 424 IPR003961 GO:0005515
Acco02g2207 716 MobiDBLite consensus disorder prediction 433 452 - -
Acco02g2207 716 Pfam PHD - plant homeodomain finger protein 126 244 IPR032881 -
Acco02g2207 716 MobiDBLite consensus disorder prediction 12 31 - -
Acco02g2207 716 SUPERFAMILY Fibronectin type III 331 407 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2207 Acco-ChrAcco02 18752914 18756909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2207 87 709 PHD Gene Family AT3G24440 47.114 0.0 527