Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2202 ATGGCAAACCGACTAAGGGAAGATGAGAAGAATGAACGAATAATTCGGGGCCTTCTGAAACTTCAAGAGAATCGTAGATGTATTAATTGCGGCAGCCTGGGACCGCAATATGTTTGCACAAATTTTTGGACATTTGTTTGCACAAACTGTGGTGGAATACACCGGGAATTCACACATCGAGTAAAATCAATTTCAATGGCTAAATTTACTTCACAAGAAGTTAATGCACTTCAGGAAGGAGGAAATCAGCGTGCAAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCTGATAGCAGTAATATTGACAGGCTCCGGGACTTTATTAAGCATGTTTATGTGGATAGAAGATATGGTGGTGAGAGGACCAATGACAAACCACCGAGAGGAAAGATGGGTGACAAGGATGATTTCTATGAAAACAGAAGAGTTGAGGCATATCAGGGAGGATCTAGAAGCCCCCCATATGAGGATGCACATGAACGTCGTTACAGTGACAAGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGTGATTATAGGAGAAGCCCAGGTTGTCCACCAATAATCAATGATTGGCGTCGTGAAGATAGATTTGCAGATCGAAGATCATCTGATGGAGATTATAAGCTGGAAGGCCAATCGCCTGAGCGAGCAAAAGATTTTGATTCTTCAAGTTCGCCTGTTGTACGGCCTGTTAGAGATATTTTGGGAGAAAATGTAGTTCCTCTTCGAATAAGTGAACCCCCCAAAATAAACAGTGGAAAGCCTGCGGATGGCTCTGCACTCACACAGAGAACAGCATCTTCCAGTAGCTTAGCATCTAGTAATGGAAACCCTGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAACCTCCTGTTGCTCCAGCAATTCCTCAAGCTCAACAAACAAATGCTGTCCAATCTGCCATGCAGCCAGCAAATTCTAGTGATAACAACTGGGCATCTTTTGATGTTGCCCCTGCAGCAAAAACAACCGAAGGTCCTTCAAATTTAAGTCCACTTGAATCTGTTCTCTCACAACTAGCAATGCCATCACCTGCCCCTGCCCCTGCACCTGCACCTGGTCAGGTTTCTGGAGTTCAAGGGCCTCTGCCAGTATCAGCTGTCACTGCCACTGCTGTTGGAGCTGGTGCTGGGACTCTTGGCAACTTCTCATCAGTGCCACCAAGTGGTACTTCTGTAACAGCCCCTGGATTGATGACAGCACCATCAATCAGCAATGCAGGCCAGTGGGCCAGTGTGCAACACAACCAACCTGTGTTCCCTGCCACGGGTAGTCATCCTACTACTCAACAATTCATTCCATCAGCAGGTGGATCTTTGAATAGTCAGCAGTGGAGTGCATCTCCAGTGCCCACAATGCAAGGGCACCCTAGCACACAAATGCCACCTGCATTCTCACTTATCTCAAAACCGACCAATGAGGTTAGCTCTGGTGCTGCTGCTTCACTGCGGTCAAAAGAAGTGCAACCAAGTGGAAGAAAAGAACTCTCCGAGGATCTCTTCACTGCAAGGTATTCATCCTTCACTTCTCCTGCTCCAGGGTGGCAAATGGGTCCTCCTCATGGCATGGGTATCTATATGCAATATAATCCTGCAGCGCACATGCCAGGTTTTCCACAGTCATCAAAATCAACAAATCCATTTGATGTCAGCAGCGAACCATCTCCAGTTCAAGCCCCAACATTTCCCTCCATATCATCCTTGCAAGGTGCTCTGCCAAGTATACCACCTTCTTCAGGTGTAATACACCCCTCAAGCGTGGGTAATCCTTCACTTTCCTGGCGCTCACCCCAGTCATCATATGGTTCAGTACTTCCTTCACAAGCTCAAGTTCATGCACCAGCAATGGCACCAAGGGCATACGTGGTGGGGCAACAAGTGCCGACTAACATGCCAATGCCTAGGCATCAAGAAATTGGGAATTCTGGCGCACAGGGAGCTGCTTTTGGCATCTCAAATCCAGATCAGCAGATAACTGGTATGTTCTCAACAGCTGCTGCGGCAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGGTGA 2124 0.4661 MANRLREDEKNERIIRGLLKLQENRRCINCGSLGPQYVCTNFWTFVCTNCGGIHREFTHRVKSISMAKFTSQEVNALQEGGNQRAKEIYFKEWDPQRHSLPDSSNIDRLRDFIKHVYVDRRYGGERTNDKPPRGKMGDKDDFYENRRVEAYQGGSRSPPYEDAHERRYSDKSSPGGRSPGYDQESRQYGDYRRSPGCPPIINDWRREDRFADRRSSDGDYKLEGQSPERAKDFDSSSSPVVRPVRDILGENVVPLRISEPPKINSGKPADGSALTQRTASSSSLASSNGNPAEVKLETTKSLIDFDAEPEPPVAPAIPQAQQTNAVQSAMQPANSSDNNWASFDVAPAAKTTEGPSNLSPLESVLSQLAMPSPAPAPAPAPGQVSGVQGPLPVSAVTATAVGAGAGTLGNFSSVPPSGTSVTAPGLMTAPSISNAGQWASVQHNQPVFPATGSHPTTQQFIPSAGGSLNSQQWSASPVPTMQGHPSTQMPPAFSLISKPTNEVSSGAAASLRSKEVQPSGRKELSEDLFTARYSSFTSPAPGWQMGPPHGMGIYMQYNPAAHMPGFPQSSKSTNPFDVSSEPSPVQAPTFPSISSLQGALPSIPPSSGVIHPSSVGNPSLSWRSPQSSYGSVLPSQAQVHAPAMAPRAYVVGQQVPTNMPMPRHQEIGNSGAQGAAFGISNPDQQITGMFSTAAAANSFSAGGNPFG 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2202 707 PANTHER ARFGAP/RECO-RELATED 1 707 IPR044820 GO:0005096
Acco02g2202 707 MobiDBLite consensus disorder prediction 504 523 - -
Acco02g2202 707 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Acco02g2202 707 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Acco02g2202 707 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Acco02g2202 707 SUPERFAMILY ArfGap/RecO-like zinc finger 11 122 IPR037278 -
Acco02g2202 707 MobiDBLite consensus disorder prediction 123 147 - -
Acco02g2202 707 MobiDBLite consensus disorder prediction 320 339 - -
Acco02g2202 707 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Acco02g2202 707 MobiDBLite consensus disorder prediction 257 293 - -
Acco02g2202 707 Pfam Putative GTPase activating protein for Arf 13 122 IPR001164 GO:0005096
Acco02g2202 707 MobiDBLite consensus disorder prediction 269 293 - -
Acco02g2202 707 MobiDBLite consensus disorder prediction 465 486 - -
Acco02g2202 707 MobiDBLite consensus disorder prediction 565 598 - -
Acco02g2202 707 MobiDBLite consensus disorder prediction 123 242 - -
Acco02g2202 707 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Acco02g2202 707 CDD ArfGap_AGFG 12 122 - -
Acco02g2202 707 MobiDBLite consensus disorder prediction 202 230 - -
Acco02g2202 707 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Acco02g2202 707 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 131 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2202 Acco-ChrAcco02 18691632 18698706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2202 12 122 C2H2 Transcription Factor Family AT4G21160 33.333 1.82e-12 67.4