Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2200 ATGAAGAACATCATCTCCTCCTTCCCTCTCTTCCATTCTCAACTTCTTCTTCTTCTTCTTCTTCCCTTCTTTCTCGCCACAGTATCTCTCTCTGCTTCACTCCATCTTCACACCTCCACCAATGCAGCTCCCACTCTCACGCAGCGTCAACTTCTCTACTACACAGACCAGTTTGGTGACAGAGGAGAGCTCGTGACCGTCGACCCTTCTTTGGTTTTCGAAAATGATCGCATCAGAAACGCCTACATTGCTTTGCAAGCCTGGAAGGAAGCCATTCACTCTGATCCCAGAAATTTCACTGCTAATTGGGTTGGACCCAATGTCTGCAACTACACTGCGGTTTACTGTGCTCGTGCGTTGGATAATCGTAGGATCCGTACAGTTGCCGGCATTGATCTCAACCATGGCGACATTGCCGGCTACTTGCCTCGAGAGCTTGGGCTTCTTGCTGATCTTGCTCTGTTCCACATTAACTCTAACAGGTTCTGTGGTACTATTCCCCATGAGTTTCGCACACTGAAACTGCTTTTTGAACTGGATCTTAGTAACAATAGGTTCGTCGGCAAGTTCCCGGAGGTGGTTCTGAGTCTTCCGTCACTCAAGTTCTTGGATCTGAGGTATAATGAATTTGAAGGGACCGTGCCCAAAGAACTCTTCGACAAGGATCTGGATGCGATCTTCATTAACAACAACCGGTTTGCGTTCGATCTTCCTGACAATTTTGGGAACTCTCCGGTGTCGGTCATCGTCCTCGCTAACAACAGGTTCCATGGCTGCATCCCGGCGAGTTTGGGAAATATGTCAAATCTCAACGAGATCATTCTGATGAACAATGCCTTCCGTTCGTGCTTGCCATCCGAGATTGGGAGGCTGAAGAATTTAACAGTGTTCGATGTGAGCATCAATCAGCTGCTGGGTCCCCTGCCAGACACCATTGGAGGTATGGTCAGTCTCGAGCAGCTGAATGTGGCTTACAATTTGCTCTCTGGGGAGATTCCTGCCAGCATTTGCATGCTACCCAATCTGCAGAACTTTACGTACTCTAATAACTTCTTCACTGGCGAGCCACCGGTGTGCTTGGCTCTGCCAGCTTTTGATGACCGAAGGAATTGCTTGCCGGCGAGGCCATTGCAGAGGTCAGCAGCTCAATGTATGGCGTTCTTGTCTCGACCAGTTGACTGTAACTCGTTCAAATGTAAACCATTTGGTCCTTCACCATCGCCCGGTGTGGTTCCCTCACCGCCCTCACAAAGTTCTCCACCGTCCCCTGCGGCGGTTCCTTCACCTTCACCGTCGCCCGTGGTGGCTCCTTCCCCACCTTCTCAAAGTTCGCCGTCGCCGTCGCCGTCGCCGGGAGGGGTTCCTTCACCACCTTCACAGAGTTCGCCTTCACCGCCGGGAGGGGTTCCTTCACCACCTTCTCAGAGTTCGCCTTCACCGCCGGGAGGGGTTCCTTCACCACCATCACAAAGTTCACCACCGCCATCGCCGGGAGTGGTTCCTTCGCCACCTTCACAAAGTTCACCTCCGCCAACGCCTGAAGTGGGTCCTTCACCTCCACAAATTTCACCTTCGCCACCAGGTGTTTCACCTTCTCCCCCTGGTTATATTCCATCTCCGCCATCGTCTTCTTCACCAGTTTACTCTCCACCATCACCTTCAAGCCCAACTCCACCATTTTCTTCTTCACCTCCATCTTCACCAGCTTACTCCCCACCGTCTCCTTCAAGCCCAACTCCACCATCGTCTTCTTCACCTCCATCTTCACCGGCTTACTCCCCACCATCTCCTTCAAGCCCAACCCCACCATCGTCTTCTTCACCAGGTTACTCTCCGCCATCTCCTTCAAGCCCAACTCCACCATTTTCTCCTTCACCTCCATCTTCACCGGTTTACTCTCCGCCATCTCCTTCTAGCCCAACTCCGGTTTATTCGTTGCCTCCACCACCACCTACCTATTCTCCATCACCCCTGCCTCCAGGTTATTCACTGCCTCCACCCTCCCCACCTTTTTCATCGCCACCAAGCTATACACCACCAAAGCCATCAAATCCAACGCCTCCCTATTATGTCCTGTCTCCACCACCACCATCACCAACGGCTCCTACAGTATCCCCACCCCCAACTTCGCCACATTATCATAACACGCCGCCGCAACATTCTCCTTCACCTTCTCACTCACATTCACCACCTATTTATCCCTATTCATTACCTCCACCACCACCTCCTGTCCCTTTTCCTCTCCCCGGCCACTCTCCACCGCCTTGCTTAGAACCACCTCCACTTCCATCCCCACCACCGTGTGACGAGCATTCACCGCCATCTTACCTTCTGCCACCATCTCCATTTCCCCTACCACCGCCTTCCCCTGATCATTACAGTTCACCACCACCTTCTCCGGTATACAAAGGTCCTATGCCACCTATTGTTGGAGTCCCATACGCGTCCCCTCCCCCACCACCCTTCTACTGA 2472 0.5243 MKNIISSFPLFHSQLLLLLLLPFFLATVSLSASLHLHTSTNAAPTLTQRQLLYYTDQFGDRGELVTVDPSLVFENDRIRNAYIALQAWKEAIHSDPRNFTANWVGPNVCNYTAVYCARALDNRRIRTVAGIDLNHGDIAGYLPRELGLLADLALFHINSNRFCGTIPHEFRTLKLLFELDLSNNRFVGKFPEVVLSLPSLKFLDLRYNEFEGTVPKELFDKDLDAIFINNNRFAFDLPDNFGNSPVSVIVLANNRFHGCIPASLGNMSNLNEIILMNNAFRSCLPSEIGRLKNLTVFDVSINQLLGPLPDTIGGMVSLEQLNVAYNLLSGEIPASICMLPNLQNFTYSNNFFTGEPPVCLALPAFDDRRNCLPARPLQRSAAQCMAFLSRPVDCNSFKCKPFGPSPSPGVVPSPPSQSSPPSPAAVPSPSPSPVVAPSPPSQSSPSPSPSPGGVPSPPSQSSPSPPGGVPSPPSQSSPSPPGGVPSPPSQSSPPPSPGVVPSPPSQSSPPPTPEVGPSPPQISPSPPGVSPSPPGYIPSPPSSSSPVYSPPSPSSPTPPFSSSPPSSPAYSPPSPSSPTPPSSSSPPSSPAYSPPSPSSPTPPSSSSPGYSPPSPSSPTPPFSPSPPSSPVYSPPSPSSPTPVYSLPPPPPTYSPSPLPPGYSLPPPSPPFSSPPSYTPPKPSNPTPPYYVLSPPPPSPTAPTVSPPPTSPHYHNTPPQHSPSPSHSHSPPIYPYSLPPPPPPVPFPLPGHSPPPCLEPPPLPSPPPCDEHSPPSYLLPPSPFPLPPPSPDHYSSPPPSPVYKGPMPPIVGVPYASPPPPPFY 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2200 823 SUPERFAMILY L domain-like 82 363 - -
Acco02g2200 823 MobiDBLite consensus disorder prediction 405 809 - -
Acco02g2200 823 Gene3D Ribonuclease Inhibitor 81 367 IPR032675 -
Acco02g2200 823 FunFam Leucine-rich repeat extensin-like protein 5 244 383 - -
Acco02g2200 823 FunFam Leucine-rich repeat extensin-like protein 1 82 243 - -
Acco02g2200 823 Pfam Leucine rich repeat 155 209 IPR001611 GO:0005515
Acco02g2200 823 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2200 Acco-ChrAcco02 18664982 18667453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2200 46 399 Leucine-rich Repeat extension Gene Families AT3G24480 77.746 0.0 613