Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2194 ATGGCTTCTCTCCCCAACGGCCACTCCATCGACGTCAAGTTCACGAAGCTCTTCATCAACGGCCAATTCGTTGATTCTGTTTCAGGGAAGGCGTTTGAGACGATAGATCCGAGTACCGGGGACGTCATCGCCAGGGTCGCCGAAGCCAGCAAGGAGGATGTTGACGCCGCCGTTCAAGTTGCCCGTCAGGCCTTTGACTCTGGTTCCTGGCCTCGCATGTCCGGCTCTGAGAGAGGAAGAATAATGATGAAATGGGCAGATCTGATAGACCAACATACAGAAGAAATAGCAGCACTAGACACCGTGGACGCCGGAAAACTATTCCAGTCGTGTAAAATGGAAGTTCCTTCAGTCGCAAATATGGTACGTTACTATGCAGGTGCTGCTGATAAAATCCACGGTGAGGTATTGAAGACGTCAGGCAAATTCCACGCATACACTTTGCTAGAACCCATTGGTGTGGTGGGTCACATCATTCCCTGGAATTTCCCCAGCACCTTGTTCTTCACCAAGGTTGGCCCTTCCTTGGCCGCCGGCTGCACCATGGTCGTCAAACCCGCCGAGCAAACTCCTCTCTCCGCCCTCTTCTACGCTCATCTCGCCAAGCTGGCAGGAATACCAGATGGTGTGCTTAATGTCGTAACTGGGTTTGGCAAAATTGCTGGTGCTGCTGTGAGCTTACATATGGACATCGACAAGGTTAGCTTTACGGGTTCAACACAAACAGGGAGGGAAGTGATGCAGGCGGCAGCGAAGAGTAATCTGAAACAAGTTTCACTTGAATTAGGAGGCAAATCACCCCTCATTATCTTTGATGATGCTGATGTGGACAAAGCTGCTGAACTTGCACTCATTGGAATCCTTTTCAACAAGGGAGAAGTGTGCGTTGCAGGCTCTCGTGTGTTTGTTCAAGAAGGCATATATGACGAGTTTGAGAAGAAGTTGGTGGAGAAGGCTAAAGCTTGGGTAGTTGGAGATCCTTTTGATTCTAATGTTCAGCAAGGTCCTCAGGTTGACAAGAGGCAATTTGAGAAGATTTTGTCGTACATAGAGCATGGAAAGAGAGAAGGAGCCACGCTGTTGACTGGGGGCAAAGCAATAGGCAACAAGGGATACTACATTGAACCTACAGTGTTCGCTAACGTTAAAGAGGACATGCTGATTGCAAAAGATGAAATATTTGGACCCGTCATGGCACTAACCAAGTTCAAAACGATGGAGGAGGCAATACAGAGAGCGAACAACACAACATATGGGCTAGCAGCAGGAATAATGACGAAGAACATTGATATAGCAAACACAGTATCGAGGTCGGTGAGAGCAGGAATAATATGGATCAACTGTTATTTTATATTTGAGCATGATGTTCCTTTTGGAGGGTACAAAGCCAGTGGGTTTGGCAAAGATTTTGGAATGGAGGCCCTTCACAAGTATCTCCAAGTTAAATCTGTGGTCACCCCTATCTACAACTCTCCATGGCACTAA 1485 0.4768 MASLPNGHSIDVKFTKLFINGQFVDSVSGKAFETIDPSTGDVIARVAEASKEDVDAAVQVARQAFDSGSWPRMSGSERGRIMMKWADLIDQHTEEIAALDTVDAGKLFQSCKMEVPSVANMVRYYAGAADKIHGEVLKTSGKFHAYTLLEPIGVVGHIIPWNFPSTLFFTKVGPSLAAGCTMVVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGFGKIAGAAVSLHMDIDKVSFTGSTQTGREVMQAAAKSNLKQVSLELGGKSPLIIFDDADVDKAAELALIGILFNKGEVCVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDSNVQQGPQVDKRQFEKILSYIEHGKREGATLLTGGKAIGNKGYYIEPTVFANVKEDMLIAKDEIFGPVMALTKFKTMEEAIQRANNTTYGLAAGIMTKNIDIANTVSRSVRAGIIWINCYFIFEHDVPFGGYKASGFGKDFGMEALHKYLQVKSVVTPIYNSPWH 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2194 494 FunFam Aldehyde dehydrogenase3 264 453 - -
Acco02g2194 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 264 453 IPR016163 GO:0016620
Acco02g2194 494 FunFam Aldehyde dehydrogenase, putative 456 482 - -
Acco02g2194 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 19 482 IPR016162 GO:0016491
Acco02g2194 494 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 484 - -
Acco02g2194 494 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 260 267 IPR029510 GO:0016491
Acco02g2194 494 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 288 299 IPR016160 GO:0016491
Acco02g2194 494 Pfam Aldehyde dehydrogenase family 23 484 IPR015590 GO:0016491
Acco02g2194 494 SUPERFAMILY ALDH-like 12 490 IPR016161 GO:0016491
Acco02g2194 494 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 19 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2194 Acco-ChrAcco02 18562186 18566282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2194 11 493 Aldehyde Dehydrogenase Gene Family AT3G24503 70.722 0.0 721