Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2177 ATGTCAACCTCGCCGTCTCCCGGAGCTTCTCCGGTCCCCACATCATCGCCGTCTACTAACTCAACTTCTCCTCCTCCGCCCACTGCCAACGTAACCGCTCCTCCTCTGCCTTCGGTCACCCCTACTGCACCGCCTCCTGCTACTCCCTCCGCTCCACCACCGGCTACTCCTTCGCCTCCGCCGCCAGCCACTCCCACTCCCACTCCTCCATCTTCCTCTCCACCGCCGCCTACGTCTCGTACCAATTCTCCACCGCCTCCGGTGACTCGGAGCTCACCTCCTCCTCCGCCGTCCGGTTCATCCACACCTTCGACTCCGACTCAAAGCACGCCTCCACCGCCTTCGTCCCCTTCTTCGTCGACTGTACCAACTGGTGCTATTGTTGGAATCGCCGCTGGTGCTTTGGCGATTCTTTTAATTCTAATCCTTGTTTGCGTATGTTGTCGGAAGAAGAAGAGGAGAACTAGTAATGCAGAATACTATGTGCCGCCACAGGGACCTAAAGGTGACCAATATGGTGGCCCACCACGTCAGTGGCAACATAATGCTCCTCCTCCTTCAGATAATGTTGTCTCCGTGATGCAAAAGCCCCCACCACCGCCGCCAGGTGCATCACGACCACCCCAATTACCAGCTTATGCCGCTAAACCTCCTCCGCCACCACTATTCCTGGGCAGCAGTGGTGGGTCAGGTTCCAACAATTCAGGTGGCGAAAATCCACACCGACCCCCTTCTCCTGGCATTCAATTGGGTTTCTCAAAGAGCACATTTACATATGAAGAGTTGGTAAGGGCAACAGATGGGTTCTCTGATGCCAACCTCCTTGGACAAGGTGGGTTTGGATATGTGCACAAAGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTGAAGGCTGGAAGTGGGCAGGGAGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGTCGAGTTCATCACAGACATCTTGTTTCTCTGGTTGGATACTGTATCACTGGACAGCAGAGATTGCTTGTTTATGAATTTGTTCCGAACAATACGTTGGAATTTCACTTGCATGGCAAGTTTTTAACTACCTTTTATATATCTGCTGCAGGAAAAGGGCGACCAACTATGGATTGGCCCACGAGACTGAAAATTGCATTAGGATCAGCGAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCCAATATCCTACTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGGCTAGCAAAGATTTCTTCTGATGTCAATACCCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACTGACAAATCAGATGTTTTCTCCTTTGGGGTCATGCTTCTAGAGCTGATTACTGGACGTCGACCAGTTGACACAACTCGTACTTACATGGATGATAGTCTGGTGGAGTGGGCAAGGCCTTTGCTTATACGTGCTCTGGAAGATCATGATTTTGATTCTGTTGTTGATCCAAGGCTCAAAGATGAATATGACGTTAATGAAATGACTCGCATGGTTGCATGTGGCGCAGCCTGCACCCGCCATTCAGCACGTCATAGACCAAAAGTGAGCCAGGTTGTTCGTGCTCTGGAAGGAGACATGTCTCTTTCAGATCTGAACGAAGGAATTAAACCTGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTACGACACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGACTTTGGGAACCCAGGAGCTTGGCGTCAGCAATGATTACAGTGCACTGACGAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCAAGACCACCCGGGAAATGGAATTGAGAAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 1962 0.5005 MSTSPSPGASPVPTSSPSTNSTSPPPPTANVTAPPLPSVTPTAPPPATPSAPPPATPSPPPPATPTPTPPSSSPPPPTSRTNSPPPPVTRSSPPPPPSGSSTPSTPTQSTPPPPSSPSSSTVPTGAIVGIAAGALAILLILILVCVCCRKKKRRTSNAEYYVPPQGPKGDQYGGPPRQWQHNAPPPSDNVVSVMQKPPPPPPGASRPPQLPAYAAKPPPPPLFLGSSGGSGSNNSGGENPHRPPSPGIQLGFSKSTFTYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGQQRLLVYEFVPNNTLEFHLHGKFLTTFYISAAGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKISSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTRTYMDDSLVEWARPLLIRALEDHDFDSVVDPRLKDEYDVNEMTRMVACGAACTRHSARHRPKVSQVVRALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMTLGTQELGVSNDYSALTSDNSLYPSGSSSEGQSRKTTREMELRKMNNHQGYSGSS 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2177 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Acco02g2177 653 SUPERFAMILY Protein kinase-like (PK-like) 243 554 IPR011009 -
Acco02g2177 653 MobiDBLite consensus disorder prediction 226 240 - -
Acco02g2177 653 Gene3D Transferase(Phosphotransferase) domain 1 346 565 - -
Acco02g2177 653 ProSiteProfiles Protein kinase domain profile. 269 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2177 653 PRINTS Proline rich extensin signature 41 62 - -
Acco02g2177 653 PRINTS Proline rich extensin signature 63 79 - -
Acco02g2177 653 PRINTS Proline rich extensin signature 10 26 - -
Acco02g2177 653 Pfam Protein tyrosine and serine/threonine kinase 274 553 IPR001245 GO:0004672|GO:0006468
Acco02g2177 653 SMART serkin_6 269 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2177 653 FunFam proline-rich receptor-like protein kinase PERK1 247 344 - -
Acco02g2177 653 MobiDBLite consensus disorder prediction 1 122 - -
Acco02g2177 653 MobiDBLite consensus disorder prediction 613 653 - -
Acco02g2177 653 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 133 615 IPR047117 -
Acco02g2177 653 FunFam Proline-rich receptor-like protein kinase PERK1 345 565 - -
Acco02g2177 653 MobiDBLite consensus disorder prediction 1 17 - -
Acco02g2177 653 Gene3D Phosphorylase Kinase; domain 1 247 344 - -
Acco02g2177 653 MobiDBLite consensus disorder prediction 155 251 - -
Acco02g2177 653 MobiDBLite consensus disorder prediction 613 631 - -
Acco02g2177 653 MobiDBLite consensus disorder prediction 191 224 - -
Acco02g2177 653 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Acco02g2177 653 MobiDBLite consensus disorder prediction 18 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2177 Acco-ChrAcco02 18364780 18368426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2177 81 636 Trihelix Transcription Factor Family AT1G70460 48.387 2.68e-163 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco02g2177 PK_Tyr_Ser-Thr 6.1e-44 CL0016