Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2176 ATGGGCACCCACCGGAGCTCCATCTTTTCTCCCTGGCTCCACATAGTGGTTATCGCCGCCTGTTTCTATCACTTCCTCCCCTCTACTGACTATGCTAGATCACAAAACCCAACCCTAAGTCCCTCCAAAGACATTTCAAATTCCACCGGAAATGTCAAGCGTCAGCCCCAAATCGCTCGACAAAACTACATCGTGCGGTTTCGGGAATACAAGACAGCCGAAGTGCACCGAACATATCTGCAATCGAGTATTCGATCCGAAGGGTGGGAATGGATCGAGCGGCGAAACCCAGCTGCGAGGTACCCCACTGATTTCGGATTGATTTCGATTGAGGATTCGGTGACGGAAGGTTTGACGGAAGAGATTCGGAAATTGGGTATGGTGAAAGATGTGAATGTGGATATGAGTTATAGGAGGGGTCTGCTTAACGATGACCGTTATAGAGCTGGTGCTTTCGTGGACGGAAAGAAGCGGCCCGGGAAGATATTCACAGCGATGTCTTTCAGTGAGGGACAGGGAGGTCACTCTTCCAAGATTAGCAACGCCTCCGTTAATTGGGGGCGGCAACTCTTGATGCAGAGATCTCAAGTTACTTCCATGTTCGGAGCCCAAGATCTTTGGGCGAAAGGGTACACTGGTGCCAAAGTCAAAATGGCCATATTTGATACTGGCATTCGTGTCAATCATCCTCATTTTCGCAACATCAAGGAGCGTACAAATTGGACAAATGAAGATACACTGAACGACAATCTCGGGCATGGGACTTTTGTTGCTGGTGTTATTGCTGGAGTAGATGCAGAATGTCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGGGTGTTCACTGATGCACAGGTGTCTTATACATCATGGTTCCTTGATGCCTTCAACTATGCCATTGCTACCAATATGGATGTTCTAAATTTGAGCATTGGTGGACCTGATTATTTGGATCTCCCATTTGTTGAGAAGGTTTGGGAGATTACTGCAAATAATATTATTATGGTTTCTGCAATCGGAAATGATGGTCCACTCTATGGAACTTTGAACAATCCAGCAGATCAAAGTGATGTGATTGGCGTTGGGGGAATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGTATGAGTACCTGGGAGCTCCCTCATGGTTATGGTCGTGTTAAGCCAGACATAGTTGCATATGGACGCGACATAATGGGATCCAAGATTAGCACAGGTTGCAAAAGTTTGTCAGGAACTAGTGTTGCTAGTCCTGTGGTTGCTGGTGTTGTATGTTTGCTTGTTAGTGTCATCCCTGAACTGGATCGGAAAACTATTTTAAATCCGGCAAGCATGAAGCAAGCATTGGTTGAGGGTGCTGCAAAACTTGCTGGTCCAAATATGTATGAGCAGGGTGCCGGCAGAGTTGATCTGTTAGAGTCATATGAGATTCTTAAGAACTATCAACCCAGGGCGAGCATCTTCCCTAGTGTTCTTGACTACAATGATTGTCCTTACTCATGGCCCTTTTGTCGTCAGCCCCTATATGCAGGTGCCATGCCAGTCATATTCAATGCCACTATTTTAAATGGAATGGGTGTTGTTGGTTATGTTGATGGTCCACCAATATGGCATCCTTCTGATGAAGAAGGGAACCTTTTAAGCATTCATTTCACATATTCAGAGGTTATCTGGCCTTGGACTGGTTACTTGGCACTTCACATGCAAATCAAGGAAGAAGGGGCACAATTTTCTGGAGAGGTTGAAGGTAATGTGACTCTTAGGGTTTCCAGTCCTCCAGCTCCTGGAGAGAAAAACCCTCGAATCAGCACATGTGTGCTTCAATTGAAGTTAAAAGTAGTGCCAACACCACCACGGTCAAAACGAATTTTGTGGGATCAGTTTCACAGCATCAAATACCCTCCTGGTTATATTCCAAGGGACTCTCTGGATGTTCGTAATGATATTCTTGACTGGCATGGGGACCATCTGCACACAAATTTCCATATCATGTTCAACAATTTAAGAGATGCTGGATATTATATTGAAACACTTGGTTCTCCTCTTACATGCTTTGATGCCCGGCAGTATGGAACACTTTTGTTGGTAGATCTTGAAGATGAGTACTTTGCTGAGGAGATTGCGAAGCTGAGAGATGATGTCATATATACTGGATTAGGACTTGCTGTCTTTGCTGAATGGTATAATGTGGATACAATGGTAAAGATGAGATTCTTTGATGATAACACACGGAGCTGGTGGACCCCTGTGACTGGAGGGGCAAATATTCCTGCCCTTAATGATCTATTGGCTCCATTTGGGATTGCTTTTGGAGATAAAATTCTAAATGGTGATTTTTCACTCTTGGGTGAGCAGAGTAGATATGCGTCTGGAACAGATATAGTGAGATTTCCAATGGGTGGCTATGTACATGGATTTCCCTTCTTGGATAGTTCAGAAAGTGGGGCCACTCGGAATGTGCTTCTGACTTCTGGGATGAACAAGGAGGATTCTCCAATTCTTGGCTTTACAGTGATGGGTGAAGGTCGTATAGCTGTGTATGGGGATTCTAATTGCCTGGACAGCAGCCATATGGTTACTAATTGTTTTTGGCTTCTCAGGAAAATACTAGATTTCACTGGTGAGGATATTAGGGATCCGGTGCTTTTCTCTGATTCAGTGAAACTGGACTCGGCGCTGTATGAAGATGACAATCAATTGCCATCTCGCAGGACTGATGTGAATTTCTCTACATATTCTGCTGTGGTGGGAAAAGAATTGATCTGCAAGACTGACGCTAAATTTGAAATATGGGGAACAAAAGGCTATAGTTTGCAGGTTAGAGGAAGAAACAGAAGATTGCCAGGATATCCTGTCATTGATCTGGGGAGAGGTTTCAATTCTTCGATTGATACCTCTAAGATTCCCTGGCGTCCCAAGGCGATTCCAAGACGTTTGATTGACTCTCCAGGGAATTACTTCAGCCTGTTCTATGGGAATGAGCCTGATGTTCCTCTTTTGGCTCGTAGTTATTGGCTTGCTCCTGCACTTGTTGCGGCTTCTGGTGTTTTGTTATGTTGCTGGCGCATTCGCCAAAAGCGACGCAGACGAAGGAAAGGATCAGGCTCTGGTAGATTGGCCAATTTATAG 3144 0.4475 MGTHRSSIFSPWLHIVVIAACFYHFLPSTDYARSQNPTLSPSKDISNSTGNVKRQPQIARQNYIVRFREYKTAEVHRTYLQSSIRSEGWEWIERRNPAARYPTDFGLISIEDSVTEGLTEEIRKLGMVKDVNVDMSYRRGLLNDDRYRAGAFVDGKKRPGKIFTAMSFSEGQGGHSSKISNASVNWGRQLLMQRSQVTSMFGAQDLWAKGYTGAKVKMAIFDTGIRVNHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKVWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPELDRKTILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKNYQPRASIFPSVLDYNDCPYSWPFCRQPLYAGAMPVIFNATILNGMGVVGYVDGPPIWHPSDEEGNLLSIHFTYSEVIWPWTGYLALHMQIKEEGAQFSGEVEGNVTLRVSSPPAPGEKNPRISTCVLQLKLKVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNNLRDAGYYIETLGSPLTCFDARQYGTLLLVDLEDEYFAEEIAKLRDDVIYTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLLGEQSRYASGTDIVRFPMGGYVHGFPFLDSSESGATRNVLLTSGMNKEDSPILGFTVMGEGRIAVYGDSNCLDSSHMVTNCFWLLRKILDFTGEDIRDPVLFSDSVKLDSALYEDDNQLPSRRTDVNFSTYSAVVGKELICKTDAKFEIWGTKGYSLQVRGRNRRLPGYPVIDLGRGFNSSIDTSKIPWRPKAIPRRLIDSPGNYFSLFYGNEPDVPLLARSYWLAPALVAASGVLLCCWRIRQKRRRRRKGSGSGRLANL 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2176 1047 ProSitePatterns Serine proteases, subtilase family, histidine active site. 253 263 IPR022398 -
Acco02g2176 1047 Gene3D Peptidase S8/S53 domain 191 481 IPR036852 GO:0004252|GO:0006508
Acco02g2176 1047 SUPERFAMILY Subtilisin-like 197 487 IPR036852 GO:0004252|GO:0006508
Acco02g2176 1047 PRINTS Subtilisin serine protease family (S8) signature 249 262 IPR015500 -
Acco02g2176 1047 PRINTS Subtilisin serine protease family (S8) signature 213 232 IPR015500 -
Acco02g2176 1047 PRINTS Subtilisin serine protease family (S8) signature 416 432 IPR015500 -
Acco02g2176 1047 ProSitePatterns Serine proteases, subtilase family, serine active site. 417 427 IPR023828 -
Acco02g2176 1047 FunFam subtilisin-like protease SBT6.1 185 479 - -
Acco02g2176 1047 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Acco02g2176 1047 CDD Peptidases_S8_SKI-1_like 207 463 IPR034185 -
Acco02g2176 1047 PANTHER PEPTIDASE S8 51 467 - -
Acco02g2176 1047 Pfam Subtilase family 214 464 IPR000209 GO:0006508|GO:0008236
Acco02g2176 1047 ProSiteProfiles Serine proteases, subtilase domain profile. 185 483 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2176 287 1045 Subtilisin-like Serine Gene Family AT5G19660 80.079 0.0 1244