Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2161 ATGGAAGGAGGTGACGGGGGTGATGGCCCTCCGAAGAATGTGTTGTTGGATTCTTCTGCTGCACCGTTACCTTTGGATGGTACAGGGAAGAAGCTAGCGAGGCAGCTCGATTTTACGGGTTTTGGTGGGGTATCGGGTACTGTGGCTTCAAGCCAACATCTGCAATTGCAATTACAGCCTCAGGCACATCCACAGTCACTGCCTCATGGACTGGCACAACAAACCATGCCTGTGATGCCAGTGCCGCCGCAAGTACCTCATTCTGTAGTGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACTTTGAAATGAAAGACTTGACTCCAAAGAAGCAAAAACAGTGCAATTGTAAGCACTCAAGATGCTTAAAGTTATACTGCGAATGTTTTGCATCAGGAATATATTGTGACGGGTGCAACTGTGTAAATTGTTTTAACAATGTTGAGAATGATGTGGCAAGACGAGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCCAGCAGCCCTCATGGAACACGTAATAGCAGGGATGAGACAGGAGAAGTTTTACTTTTGGGAAAGCACAACAAGGGCTGCCACTGTAAAAGATCAGGATGCCTCAAAAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCTTGGACTGCAAAAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTATTCCACGGAGATCAAAATAACAACATAGCATATACTCAGCAGGTAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATCCCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAGCACTTTTTTGGGCCAACAGTCAAGGATCCATCTGTTGGCAGGCATGGGCAGTTTCAACAGTCAAACAATGTCGAAGTTCCTGCTCCATCCTCTTCCTCGCGTTCTGTCCCTGGTGCTTGGGTTGGAAGTGCTGCAGTAGGTCCTTCAAATTTTGCGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAACTTTGCTCTGTTCTGGTGCTAGTATCAGGACAAGCTGCGAAGACACACTCAGGACCAGATCAGAAAAATTTAATGGACAAGAAGCGAATTGAAGATCAGACAGAAACTGCCCTTGCTTCGTCAACTCAACAGCAATTGCATAGTCAAATGGAGACTGACATTGAGAAAACTGTGGCTGATGATTGTTTGAGTGCAAACCAGACTGATAAAATTGGCCCTGATGATTCCACTTCAGATGGTGCTGATGTCTCAAGGGGGAGGCCAATGTCTCCTGGAACTCTCGCCTTGATGTGCGATGAGGAAGATGCAATGTTCATGACAGCTCCCTCTCCTAGTGGTTTGATGGCCCACGCCTGCACCACATCTTTACAGTCTGCTCCTGGACAAGGCATGACAGAGGCGCATGCAGAGCAAGAAACGATTGTATTGACAAAGTTCAGAGATTTTCTGAATAGGGTTATCACTATGGGAGAAATAATTGAAACAAAGCATTCTTCATTAGCTAGAAGTGTATTGGAGACTCAAAAGGACCCGGTCAGCAATAATGTTGGAAGTACAAATACTAAGACAACACAACATCAGGTTGCCACTAGTAATGGTGTTGCCAAAGCTGCAGTCCCGTCCATGGCCACAAGTATGAACATAATAACTCCAACAACTTTTATACCTAATAATATTATTCCTGAAAATGGGGAAAGTAAGCCAAAGATTGAAAAGGAGATATGA 1794 0.4443 MEGGDGGDGPPKNVLLDSSAAPLPLDGTGKKLARQLDFTGFGGVSGTVASSQHLQLQLQPQAHPQSLPHGLAQQTMPVMPVPPQVPHSVVRVGKPESPKSRSRPNFEMKDLTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCVNCFNNVENDVARREAVEATLERNPNAFRPKIASSPHGTRNSRDETGEVLLLGKHNKGCHCKRSGCLKKYCECFQANILCSENCKCLDCKNFEGSEERQALFHGDQNNNIAYTQQVANAAITGAIGSSGYSSPPVSKKRKGQEHFFGPTVKDPSVGRHGQFQQSNNVEVPAPSSSSRSVPGAWVGSAAVGPSNFAYRSLLADIIQPQHLKELCSVLVLVSGQAAKTHSGPDQKNLMDKKRIEDQTETALASSTQQQLHSQMETDIEKTVADDCLSANQTDKIGPDDSTSDGADVSRGRPMSPGTLALMCDEEDAMFMTAPSPSGLMAHACTTSLQSAPGQGMTEAHAEQETIVLTKFRDFLNRVITMGEIIETKHSSLARSVLETQKDPVSNNVGSTNTKTTQHQVATSNGVAKAAVPSMATSMNIITPTTFIPNNIIPENGESKPKIEKEI 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2161 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Acco02g2161 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Acco02g2161 597 PANTHER TESMIN/TSO1-RELATED 49 515 IPR028307 -
Acco02g2161 597 SMART CXC_2 199 240 IPR033467 -
Acco02g2161 597 SMART CXC_2 114 154 IPR033467 -
Acco02g2161 597 MobiDBLite consensus disorder prediction 88 109 - -
Acco02g2161 597 MobiDBLite consensus disorder prediction 94 109 - -
Acco02g2161 597 MobiDBLite consensus disorder prediction 1 28 - -
Acco02g2161 597 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Acco02g2161 597 MobiDBLite consensus disorder prediction 276 325 - -
Acco02g2161 597 MobiDBLite consensus disorder prediction 421 449 - -
Acco02g2161 597 MobiDBLite consensus disorder prediction 301 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2161 Acco-ChrAcco02 18235444 18243699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2161 2 559 CPP Transcription Factor Family AT4G29000 53.516 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Acco02g2161 TCR 4.6e-12 No_clan