Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2158 ATGACGGACATGGACCCTCCTCCCAAGAGCTGGAGCATCTACACCCGAGCTGAGATTCTGGCCAAGTACCAAGTCATGGAGCGGGTCGGCTCTGGAACTTACTCCGACGTCTACAAAGGCCGCCGTCTCTCCGATGATCTCATCGTCGCCCTCAAAGAAATTCACGATTACCAATCTGCCATGCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTCCCCTAACGTCGTCGTCTTGCACGAGTACTTCTGGCGCGAGGATGAGGACGCCGTCCTCGTTCTTGAGTTTTTGAGAACTGACTTGTTGACGGTCATCAAAGAGGCCAAGAAGGAGGGTGCGGGTCTAATCGTTGGGGAGATTAAGCAGTGGATGATCCAGATTCTTTGCGGCGTCGATGCGTGCCACACAAATTTGATCATGCATCGAGATTTGAAGCCCAGTAATTTATTGATTTCGGAGGATGGCGTGCTGAAGTTGGCTGATTTTGGACAGGCACGGGTACTTATAGACCCTGGATTTCATGCTATGGATGAAAACCCACCACCATATGAAGACGATATTTCAAATCATGAGAGATCTCTTCAAAATCCTGAAGCATTTCCTCAGACACAGACACACGACCAAAACCAAGAAGGCTATGGAAATCAGGAACAGAGAGCTGTAACGCAAGATGAATATTATAGAGTATTAGATGAGATTAAAACTAGGAGCTCCACAGATGACATGGATAAGGATACGAACTTCCAGGATGGAAATACATCTTGTCTTGCAACTTGTACAATAAGTGACATAGAAGATGATTTTATGAAGGGTTCGTTTACTTATGAAGCAGATGTCACAGACAATGAAGAAGGTGTTCTCACATCATGTGTTGGAACCCGATGGTACAGGTCTCCTGAACTGCTTTATGGATCTGATGACTATGGGTTAGAGATTGATCTCTGGTCATTGGGCTGCATCTTTGCAGAGATCCTAACTCTGGAGCCCTTATTTCCAGGGACAAGTGATATTGATCAGCTCAGTAGAATTATTGACGTTTTAGGCAACCTCAATGAGGAAGTTTGGCCTGCTTGTTCCAAGCTTCCTGATTATGAAAAAATCTCGTTCACTAAGGTGGAGAACCCTCCAGGTATTGAAGGCTGCCTGCCCAACCGATCGCCTGATGAAGTCTCTCTAGTGAAGAAGCTGGCTTGTTATGATCCAGCTAGAAGAGCTACAGCAATGGAGCTTCTCCAAGACAAGTATTTTGGTGAAGAACCTCTTCCTATACCTATTTCTGAGCTGCGAGTTCCTTTGACAAGAAGTTCACACGATGAAGACTCTCATAATCTTGATGATCTGGATTTATCTGATTATGAGGACTTTAACCCTGTCAATGTCATCAAAACTGGCACTGGTTTCTCTATACAATTTCCCTGA 1419 0.4553 MTDMDPPPKSWSIYTRAEILAKYQVMERVGSGTYSDVYKGRRLSDDLIVALKEIHDYQSAMREIEALQILQGSPNVVVLHEYFWREDEDAVLVLEFLRTDLLTVIKEAKKEGAGLIVGEIKQWMIQILCGVDACHTNLIMHRDLKPSNLLISEDGVLKLADFGQARVLIDPGFHAMDENPPPYEDDISNHERSLQNPEAFPQTQTHDQNQEGYGNQEQRAVTQDEYYRVLDEIKTRSSTDDMDKDTNFQDGNTSCLATCTISDIEDDFMKGSFTYEADVTDNEEGVLTSCVGTRWYRSPELLYGSDDYGLEIDLWSLGCIFAEILTLEPLFPGTSDIDQLSRIIDVLGNLNEEVWPACSKLPDYEKISFTKVENPPGIEGCLPNRSPDEVSLVKKLACYDPARRATAMELLQDKYFGEEPLPIPISELRVPLTRSSHDEDSHNLDDLDLSDYEDFNPVNVIKTGTGFSIQFP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2158 472 SMART serkin_6 23 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2158 472 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Acco02g2158 472 SUPERFAMILY Protein kinase-like (PK-like) 7 444 IPR011009 -
Acco02g2158 472 Gene3D Transferase(Phosphotransferase) domain 1 254 423 - -
Acco02g2158 472 FunFam Cyclin-dependent kinase F-1 14 108 - -
Acco02g2158 472 MobiDBLite consensus disorder prediction 176 217 - -
Acco02g2158 472 Gene3D Transferase(Phosphotransferase) domain 1 15 212 - -
Acco02g2158 472 PANTHER CELL DIVISION PROTEIN KINASE 22 422 - -
Acco02g2158 472 ProSiteProfiles Protein kinase domain profile. 23 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2158 472 Pfam Protein kinase domain 284 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2158 472 Pfam Protein kinase domain 23 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2158 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Acco02g2158 472 MobiDBLite consensus disorder prediction 193 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2158 Acco-ChrAcco02 18182188 18184092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2158 7 472 Core Cell Cycle Gene Families AT4G28980 61.506 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Acco02g2158 Pkinase 3.1e-32 CL0016