Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2152 ATGAATAGAGGTCATCTTCTTCAGCAGAGCTCACCAGTTCAACAAATGATGGCGAACCCTAACTGGTGGAACATCAATAATATTAACACCATGCGCAGTCCTCAACAACCTTCTCCTTTCTTATCGTCATCTCCCTCCAATTTTCAACAGCTTCCTTCTTGGCAACATCATGACCTCAATAATCAACAACCCTTTCCAGACTCTTGGACCCAACTTCTCATGGGTGGATCGGTGGGTGAAGAAGAAAGAGGTATGGGTCAGTTTCTTCAGGCACCCAATATTAATGCTGCTTTGGTGGATATCAAGCAAGAAAGTTCGGTGAATAGCTATGGTTATGCACATGGAAGCAGCAATGAAGAATTTCAGGCAATAAAACCTACTGGTTGGCCTCAAATGGTTGTTCCAGCTTCTTCCCCAAAGTCCTGTGTCACTAGTTTTAGCAGCAATATGTTAGATTTCTCTAACAATCACACTGATGCTAAGCCTTCTCTTCCAGATCCATCTTCTGAGTGCAATAGCAGTGCAAGTGGTGGGGCAGTGAAGAAGGCTAGAGTTCAAGCTTCTGGAGCTCAATCTACCTTCAAGGTTCGGAAGGAGAAGCTGGGTGACAGAATCACAGCCCTTCATCAGCTAGTTTCTCCATTTGGGAAGACTGACACAGCGTCTGTGCTGTTAGAGGCAATTGGGTATATCAGATTCCTTCAGAGTCAAATCGAGGCTCTTAGCATACCATACTTGGGCAATAGTACCAATACATCATCTAACATCAGGCACCTCCAACAATCTACAGTTCAAGGAGAGAACAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAACAATGAAAATAGCTTGAAGAGGAAAGCCCCTGGTTGTAATCCACAGGAATCAAGAGAAGAAGGGAAGAAGGACCTGAGAAGTAGAGGGTTGTGTCTGGTTCCAGTGTCGTGCACAATACAAGTTGGGAGTGATAATGGAGCAGACTATTGGGCTCCTGCACTAGGCGCTGGGTTTCGATAG 1023 0.4506 MNRGHLLQQSSPVQQMMANPNWWNINNINTMRSPQQPSPFLSSSPSNFQQLPSWQHHDLNNQQPFPDSWTQLLMGGSVGEEERGMGQFLQAPNINAALVDIKQESSVNSYGYAHGSSNEEFQAIKPTGWPQMVVPASSPKSCVTSFSSNMLDFSNNHTDAKPSLPDPSSECNSSASGGAVKKARVQASGAQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSIPYLGNSTNTSSNIRHLQQSTVQGENNCIFPEDPGQLLNNENSLKRKAPGCNPQESREEGKKDLRSRGLCLVPVSCTIQVGSDNGADYWAPALGAGFR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2152 340 MobiDBLite consensus disorder prediction 156 176 - -
Acco02g2152 340 Gene3D - 192 257 IPR036638 GO:0046983
Acco02g2152 340 MobiDBLite consensus disorder prediction 281 304 - -
Acco02g2152 340 FunFam transcription factor bHLH68 isoform X1 192 245 - -
Acco02g2152 340 CDD bHLH_AtbHLH_like 193 242 IPR045239 -
Acco02g2152 340 MobiDBLite consensus disorder prediction 156 178 - -
Acco02g2152 340 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 245 IPR036638 GO:0046983
Acco02g2152 340 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 321 - -
Acco02g2152 340 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 234 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2152 Acco-ChrAcco02 18109269 18113114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2152 87 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 50.926 9.78e-48 162