Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2143 ATGGAACGGATTGTAGGCAGCAAGTATAAGCTTGGTCGCAAGATCGGAAGCGGATCCTTCGGTGAAATTTATCTGGCCACGCATATTGATACTTTTGAGATCGTCGCTGTCAAGATCGAGAATAGTAAAACAAAGCATCCGCAGTTGCTTTATGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGCATTCCTAGTATAAAATGGTCTGGCGTTGATGGGGAAGAGAATGTACTTGTTCTTGATTTGCTGGGACCGAGTCTTGAGGATCTGTTTGTGTATTGTGGAAGAAAGTTTTCATTGAAGACAGTCTTAATGCTGGCTGATCAAATGATCACTAGAATAGAATATGTGCACTCGAAGGGATTTTTACATAGGGATATAAAACCCGATAACTTTCTCATGGGACTTGGTCGGAAGGCTAACCAGGTTTATATAATTGATTTTGGTCTTGCGAAAAGGTATCGGGACTCCTCAACCAATCGCCATATCCCTTATAGGGAGAACAAAAATTTAACAGGGACTGCACGTTATGCAAGCTGCAATACTCATCTTGGGATTGAACAAAGCCGACGGGATGACTTGGAGTCACTGGGCTATGTTCTTCTGTACTTCCTGAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACGAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAATTGTCAACTCCCATTGAGGTCCTCTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTTCACTACTGCCACTCTCTGACTTTTGACCAGCGGCCTGATTATGGGTTCTTGAAACGCGTATTTCGGGAACTATTTACGCGAGAAGGTTATGAATTTGACTACATATTTGATTGGACCATCTTGAAGTATCAGCAGGCACAGAAGAACAAATCTCAGCCGCGCATACCTCCGGTTACTGGAGCAAGCAACAGTCGTGCAATGCCAATGGATGTTGACAAGCATCATGGTGATGTATCAGATCACATTAGATCAGGCAATCCTACCAGTTCTGGTGTTAAATTGCAGTTTAAATCACCAATGGGCAGAAATTTAAATCCTGAACATCCGTTGAAGAAGAATATTTTTGGAGAGGAGAATATGCCCGGCTAA 1125 0.424 MERIVGSKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPSIKWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSSTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRELFTREGYEFDYIFDWTILKYQQAQKNKSQPRIPPVTGASNSRAMPMDVDKHHGDVSDHIRSGNPTSSGVKLQFKSPMGRNLNPEHPLKKNIFGEENMPG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2143 374 CDD STKc_CK1_delta_epsilon 8 282 - -
Acco02g2143 374 MobiDBLite consensus disorder prediction 350 374 - -
Acco02g2143 374 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2143 374 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Acco02g2143 374 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2143 374 PANTHER CASEIN KINASE-RELATED 8 319 - -
Acco02g2143 374 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2143 374 FunFam Casein kinase I isoform delta-like 1 339 - -
Acco02g2143 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Acco02g2143 374 Gene3D Transferase(Phosphotransferase) domain 1 1 329 - -
Acco02g2143 374 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2143 Acco-ChrAcco02 17994369 17997953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2143 5 215 EF-hand Containing Proteins AT4G23650 29.493 1.20e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Acco02g2143 Pkinase 3.1e-28 CL0016