Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2112 ATGGTTGTTTCAGCCATGGATAACATATTTGTTTCAGAAGCCAGTACTAACCTGGGCGGCACGCCCTCCCTGCGCCCATCGCCCAGCCACTCCATCGATCTGGGGGCTTTCGACCTCGACGAGGCCCTCGCCTCGGCCGGCCATTCATGCCGCCGATTCGCTCGGTCTCAGAGCTTGGTGGCCACGTTGCCGGCGGTTCAACGCACCGACGCCGCCGATGCTGTTTGCTCGGTTTGCATGGAAGGCTTTGATTCTGACGAAAACAAACAAATACCCTGCGGCCACGTGTACCACTCCGGCTGCATCACCGCCTGGATCTCTCGCTCCAACTCTTGCCCACTTTGCCGCTTCCATATCTTTCTCTACTCTCATTAA 375 0.576 MVVSAMDNIFVSEASTNLGGTPSLRPSPSHSIDLGAFDLDEALASAGHSCRRFARSQSLVATLPAVQRTDAADAVCSVCMEGFDSDENKQIPCGHVYHSGCITAWISRSNSCPLCRFHIFLYSH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2112 124 SMART ring_2 76 115 IPR001841 -
Acco02g2112 124 ProSiteProfiles Zinc finger RING-type profile. 76 116 IPR001841 -
Acco02g2112 124 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 54 118 - -
Acco02g2112 124 Pfam Ring finger domain 76 116 IPR001841 -
Acco02g2112 124 SUPERFAMILY RING/U-box 70 122 - -
Acco02g2112 124 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 122 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2112 Acco-ChrAcco02 17678286 17678660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2112 56 121 C3H Transcription Factor Family AT1G68180 40.000 3.93e-13 62.0