Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2109 ATGGGTTCCTCAGAAAATGAAGTGTTGGAGAAGAAAGAGAAGAGTACTGGAAAAGAGAGATCTTTAGCCATAATATTCAGATATAGTGATTGGATTGATTGGGTGCTCATGGTAATGGGTGCTTTAGGTGCAATAGGAGATGGAATGTCCACCAACGTATTGCTCATATTTGTTAGCCGTATTATGAACAGCTTGGGTTATGGGAGTAATAATCACCACAATAGTGTGAATTTCATGGCTGAGGTCGAAAAGTGCAGTTTATATTTTTTGTATTTGGGATTAGCAGCCATGGTGGTGGCCTTCATGGAAGGGTATTGCTGGAGTAAAACAGGGGAGAGGCAGGTGCTGAGAATTCGGTACAAGTATTTGGAAGCTGTGCTGAGACAAGAAGTTGGGCTATTCGATTCCCAAGAAGCTACCACCTCAGAAATCATCAATAGCATCTCAAAGGACACTTCTCTCATCCAAGAGGTTCTCAGTGAAAAGGTACCTCTATTCTTTATGCACTCATCATCCTTCATGTCTGGAGTTGCATTTTCTGCATATTTCTGTTGGAGGGTGACTTTAGCAGCATTCCCAACTTTGCTTTTGCTGATTATTCCTGGAATGCTTTACGGCAAGTTCCTAATCTATCTCTCAAAGAAGTCATATAAGGAGTATGGCAAAGCAAACACCATAGTAGAACAGGCTCTAAGCTCCATTAAAACCATATATTCCTTCACTGCGGAGAAGAGAATCATGCACAAGTATTCAGCTATACTGGACACAACTTCAGAGCTAGGAATCAAACAAGGCATCGCAAAGGGTCTTGCTGTAGGAAGTATGGGTCTGTCGTTTGCAATATGGGCTTTTCTTTCTTGGCATGGAAGCCGTTTGGTTATGTACAAAGGTGAAAGTGGAGGAAAAGTCTACGCAGCTAGTGTCACCTTCATTATGAGCGGCCTATCCCTTGGAGTTGTGCTTCCTGATCTCAAATACTTTACAGAAGCATCTGTTGCTGCATCACGCATATTTGAAGTGATTGACAGGATACCATCCATTGATGTTGAAGACACAAAAGGACTTGTGTTAGAACACATAACTGGGAAGCTAGAATTTGAGCATGTGAAATTCACATACCCTTCTCGCCCAGAAACCCCTGTACTAAGAGATTTCAGTCTCAGAGTTGAAGCAGGGAAAACTGTTGCTTTGGTCGGTGCCAGTGGAAGTGGAAAATCCACTGCAATTGCATTATTGCAGAGATTTTATGATGTCAATGAAGGTGTTGTGAGGATTGATGGTGAAGACATAAGAAGCTTACAGTTGAAATGGATAAGAAGCCAAATGGGGCTAGTAAGTCAAGAACATGCACTATTTGGAACATCTATAAAAGAAAATATCATGTTTGGGAAGCCAGATGCCACCATGGATGAAGTAATTGCTGCAGCCACTGCTGCTAATGCTCATAACTTCATAAGGCAGCTTCCTGAAGGTTATGAGACCAAGATTGGAGAAAAGGGGGCACTTTTATCAGGTGGACAAAAGCAGAGAATAGCCATAGCTAGAGCCATCATAAAGAATCCAGTAATTCTTCTACTTGATGAAGCAACTAGTGCTCTTGACTCTGAATCTGAATCACTGGTTCAGACTGCTCTTGATCAGGCCTCCATGGGAAGGACCACTTTGGTTGTTGCCCACAAACTATCAACTATTAGAAATGCAGACCTCATAGCAGTGGTCAATGGTGGATGTGTTATTGAAACAGGCACACATAATGAACTCATAAACCGACAAAATGACCACTATGCAAAACTAGCAAAACTACAGAGACAACTAAGCTGTGATGACCAAGAACAAAATCCAGAAATGGGCATTATTTCTTCTGCCGCTAGAAGCAGTGCTGGTAGACCAAGCACTGCAAGGTCAAGCCCTGCCATGTTCCCAAAATCACCCTTACCTGATGACAATGCCCTTTCAGCTCCTATCTCTTACCCTCCTCCTTCGTTTGGTCGTCTTCTTTCTTTGAACTCATCTGAATGGAAACATGGTCTAATTGGAAGCCTCTCAGCTATAGCATCTGGCTCAGTTCAACCTATATATGCCTTCACCGTTGGAGGAGTGATTTCTGCATTTTTTGTTCAAAGCCATGAAGAAATGCGTCATAGGATCAGAAATTACTGTTTTATTTTCTCATTCCTCGCCCTTGCTTCTATCATCGTCAATCTCATTCAACACTACAATTTTGCTTACATGGGAGAGAAGTTAACAAAGAGGGTAAGATTGAGCATGCTAGAGAAGATCTTAACTTTTGAAACTGCATGGTTTGAGGAAGAACAAAACTCCAGTGGAGCCTTATGCTCAAGGTTGAGCAATGAGGCTTCCATGGTGAAATCACTAGTCGCAGATCGAGTTTCTCTACTGGTACATACCACTTCTGCTGTAACAATCGCCATGATCATAGGCCTCGTGGTTGCATGGAAGCTTGCTCTTGTTATGATAGCAGTTCAACCACTCACAATTCTCTGCTTCTACACAAGAAAGGTCTTGCTCTCAACACTCTCAACCAAATTCATCAGGGCTCAAAGCCAAAGCACACAAATTGCTGTGGAAGCAGTTTATAATCACAGAATTGTGACTTCATTTGGAAGCTCAAGACTAGTTCTGAAACTGTTCGACGAGGCTCAGGAGGCACCGAGGAAGGGAGCGAGGAAGAAGTCATGGCTCGCCGGAATAGGGATGGGTTCTGCTCTGTGTCTAACTTTCATGTCATGGGCTTTGGATTTCTGGTTCGGGGGCACGTTGGTGCAAAAGGGTGAAATATCAGCAGGCGCTGTGTTTAAGACATTCTTCGTTTTGGTCAGCACCGGCAAAGTCATCGCTGACGCCGGAAGCATGACTTCCGACCTCGCCAAAACCTCCACCGCCGTCGCCTCCGTCTTTGAAATCCTTGACCGCAAATCTTTAATCCCCCAGGCTGGAGATGGAACTAGCGGTGGGTGTAAGTTGGAAAAGATTAGTGGGAAGATAGAGATGAAGAACGTTGATTTTTCATATCCAAGCAGGAAGGAGACTCCAATTCTGAGACAGTTTTGCTTGGAGGTGAAAGCAGGAACGAGTATCGGACTAGTTGGGAAGAGTGGGTGTGGGAAATCAACAGTGATAGCTTTGATTCAAAGGTTTTACGAGGTTGAGAGAGGATTTGTCAAAGTGGATGGTGTAGACATAAGGGAATTAGACACACATTGGTATAGACAACACACAGCACTCGTAAGCCAAGAGCCTGTAATATACTCCGGCACCATCCGTGAAAACATCTTGTTTGGCAAGCCAAACGCCACAGAATATGAAGTGGTCGAGGCCGCCCGAGCAGCAAATGCTCATGAATTCATCTCATCAGTGAAGGATGGGTATGAGACGGAATGTGGGGAGAGGGGAGTGCAATTGTCAGGAGGACAGAAGCAGAGAATAGCGATTGCAAGAGCGATAATTAGGAACCCAACAATACTACTGCTAGATGAAGCGACGAGTGCTTTAGACGTACAATCAGAACAAATAGTGCAGGAAGCTCTTGACAGGATTATGGTTGGGAGGACTACCATTGTTGTTGCACATAGACTGAATACCATTAAGCATCTTGACTCAATTGCTTATGTTGCTGATGGCAAGGTTATAGAGCGAGGAACCTATGCTCGCTTAAGGCACATGAAAGGTGCCTTCTTCAACCTCTCCACCCATCAAACTTAG 3723 0.4376 MGSSENEVLEKKEKSTGKERSLAIIFRYSDWIDWVLMVMGALGAIGDGMSTNVLLIFVSRIMNSLGYGSNNHHNSVNFMAEVEKCSLYFLYLGLAAMVVAFMEGYCWSKTGERQVLRIRYKYLEAVLRQEVGLFDSQEATTSEIINSISKDTSLIQEVLSEKVPLFFMHSSSFMSGVAFSAYFCWRVTLAAFPTLLLLIIPGMLYGKFLIYLSKKSYKEYGKANTIVEQALSSIKTIYSFTAEKRIMHKYSAILDTTSELGIKQGIAKGLAVGSMGLSFAIWAFLSWHGSRLVMYKGESGGKVYAASVTFIMSGLSLGVVLPDLKYFTEASVAASRIFEVIDRIPSIDVEDTKGLVLEHITGKLEFEHVKFTYPSRPETPVLRDFSLRVEAGKTVALVGASGSGKSTAIALLQRFYDVNEGVVRIDGEDIRSLQLKWIRSQMGLVSQEHALFGTSIKENIMFGKPDATMDEVIAAATAANAHNFIRQLPEGYETKIGEKGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESESLVQTALDQASMGRTTLVVAHKLSTIRNADLIAVVNGGCVIETGTHNELINRQNDHYAKLAKLQRQLSCDDQEQNPEMGIISSAARSSAGRPSTARSSPAMFPKSPLPDDNALSAPISYPPPSFGRLLSLNSSEWKHGLIGSLSAIASGSVQPIYAFTVGGVISAFFVQSHEEMRHRIRNYCFIFSFLALASIIVNLIQHYNFAYMGEKLTKRVRLSMLEKILTFETAWFEEEQNSSGALCSRLSNEASMVKSLVADRVSLLVHTTSAVTIAMIIGLVVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFIRAQSQSTQIAVEAVYNHRIVTSFGSSRLVLKLFDEAQEAPRKGARKKSWLAGIGMGSALCLTFMSWALDFWFGGTLVQKGEISAGAVFKTFFVLVSTGKVIADAGSMTSDLAKTSTAVASVFEILDRKSLIPQAGDGTSGGCKLEKISGKIEMKNVDFSYPSRKETPILRQFCLEVKAGTSIGLVGKSGCGKSTVIALIQRFYEVERGFVKVDGVDIRELDTHWYRQHTALVSQEPVIYSGTIRENILFGKPNATEYEVVEAARAANAHEFISSVKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQIVQEALDRIMVGRTTIVVAHRLNTIKHLDSIAYVADGKVIERGTYARLRHMKGAFFNLSTHQT 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2109 1240 FunFam ABC transporter B family member 4 354 611 - -
Acco02g2109 1240 SMART AAA_5 1029 1221 IPR003593 GO:0016887
Acco02g2109 1240 SMART AAA_5 391 583 IPR003593 GO:0016887
Acco02g2109 1240 SUPERFAMILY ABC transporter transmembrane region 664 978 IPR036640 GO:0005524|GO:0016020
Acco02g2109 1240 FunFam ABC multidrug transporter SitT 992 1240 - -
Acco02g2109 1240 Pfam ABC transporter transmembrane region 678 947 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g2109 1240 Pfam ABC transporter transmembrane region 39 309 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g2109 1240 SUPERFAMILY ABC transporter transmembrane region 19 348 IPR036640 GO:0005524|GO:0016020
Acco02g2109 1240 Pfam ABC transporter 382 531 IPR003439 GO:0005524
Acco02g2109 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g2109 1240 MobiDBLite consensus disorder prediction 619 638 - -
Acco02g2109 1240 CDD ABC_6TM_Pgp_ABCB1_D2_like 666 982 - -
Acco02g2109 1240 ProSitePatterns ABC transporters family signature. 503 517 IPR017871 GO:0005524|GO:0016887
Acco02g2109 1240 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 337 - -
Acco02g2109 1240 PANTHER ABC TRANSPORTER B FAMILY 6 689 IPR039421 -
Acco02g2109 1240 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 364 600 IPR003439 GO:0005524
Acco02g2109 1240 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1002 1238 IPR003439 GO:0005524
Acco02g2109 1240 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 677 964 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g2109 1240 Coils Coil 584 604 - -
Acco02g2109 1240 Pfam ABC transporter 1022 1169 IPR003439 GO:0005524
Acco02g2109 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 602 IPR027417 -
Acco02g2109 1240 Gene3D - 354 603 IPR027417 -
Acco02g2109 1240 CDD ABC_MTABC3_MDL1_MDL2 365 602 - -
Acco02g2109 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 994 1239 IPR027417 -
Acco02g2109 1240 FunFam ABC transporter B family member 1 24 361 - -
Acco02g2109 1240 ProSitePatterns ABC transporters family signature. 1141 1155 IPR017871 GO:0005524|GO:0016887
Acco02g2109 1240 Gene3D - 992 1240 IPR027417 -
Acco02g2109 1240 FunFam Putative ABC transporter B family member 8 645 986 - -
Acco02g2109 1240 Gene3D ABC transporter type 1, transmembrane domain 25 904 IPR036640 GO:0005524|GO:0016020
Acco02g2109 1240 MobiDBLite consensus disorder prediction 619 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2109 Acco-ChrAcco02 17642514 17649002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2109 33 603 Calmodulin-binding Proteins AT2G36910 37.069 9.73e-105 358