Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2102 ATGGAAAAAGAGGGAATTGCATCACGAGAGTTTCTGACATGTTTAGACTCTGAGAAGTTCAATCAACTATTTCTTCAGGACCCTGTACTCTCTATCTGTATAGCTGAGCAAATGGGAAGAGCCACTCGGTGGTTGAAGAGCTTGTTTGGGATAAAGAAAGACAGAAACCATGTTTCTGAAGGAGAACTCGGAGATTTATGTCACAATCCAACCACTATACCACCAAACATCTCGCCTGCTGAAGCTGCTTGGCTTCAGTCTTTCTACACAGAAACAGAGAAGCAGCAGAACAAGCACGCCATTGCGGTGGCCGCAGCCACAGCTGCCGCCGCTGACGCCGCCGTAGCAGCCGCTCAGGCTGCGGTCGCCGTGGTTAGGCTCACCAGCCATGGCAGAGGCACCATGTTCGGCGGCGGCGGACACGAGAGATGGGCTGCCGTTAAGATTCAAACAGTATTCAGGGGTTACTTGGCAAGAAAGGCGCTGAGAGCTTTGAAAGGATTGGTGAAATTACAAGCACTTGTGAAAGGCTATTTAGTGAGGAAGGAAGCGGCGGCAACATTGCATGGTATGCAAGCTCTGATTAGAGCCCAAGCCACTGTGAGGTCTCAAAAAGCTAGTCGCAGGCTCATGAACAGAGACAATGAAGTGTATAGATTTGAAGCCAGAGCTCGAACGTCCATGGAGAGATTTGATGACATTAGGAGTGAGCACACAGCACCAATTCACAGCAGAAGGATGTCTTCTTCTTTCGATTCAACAATAAATAACACTAACAGTTTTGATGGAAGCCCCAAAATTTTGGAAGTGGACACTGGTAGGCCAAGATCGAGGTCTCGGAGGACCAACACTTCAATTTCAGATTTTGGCGATGACCCACAATTCCAAGCACTTTCCTCTCCTCTTCCGGTTCCTTGTTGTCGTACCCCAGCTCGGTTATCGATACCGGACTGTGGCCGGAATCTGCAGGTCTCCTCCGATTGGGGTTTGTCGGTGGAAGAATGCAGGTCGTCGACGGCACAGAGCACTCCTCGGTTCGCCAATTCTTGGGGGTCGTTTAGTTGTAACGCGACGGCTTGCCGGAGCGTTTGCGGTGACGGCGGCAGCGGTGGCGATGGTTTGTTTCATCGGCAATACGGGCATTATCCGAATTACATGGCGAATACTCAGTCGTTCAGGGCGAAATTGAGGTCTCACAGTGCTCCGAAACAGAGGCCAGAGCCGAAGAGGAGGGTATCTTTGAACGAATTGCTGGAATGTAGGAGTAGTTTGAGCGGAGTTAGAATGCAGAGATCTTGCTCCCAGGTTCAGGAAGCCATTAATTTCAAGAATGCCGTGATGGGGAAGCTGGAAAAGTCTGGAGAATTTGGGAGAGAAGGAAGGGATAGCAATTACTGGCAGAGGAGGTGGTGA 1413 0.5011 MEKEGIASREFLTCLDSEKFNQLFLQDPVLSICIAEQMGRATRWLKSLFGIKKDRNHVSEGELGDLCHNPTTIPPNISPAEAAWLQSFYTETEKQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGGHERWAAVKIQTVFRGYLARKALRALKGLVKLQALVKGYLVRKEAAATLHGMQALIRAQATVRSQKASRRLMNRDNEVYRFEARARTSMERFDDIRSEHTAPIHSRRMSSSFDSTINNTNSFDGSPKILEVDTGRPRSRSRRTNTSISDFGDDPQFQALSSPLPVPCCRTPARLSIPDCGRNLQVSSDWGLSVEECRSSTAQSTPRFANSWGSFSCNATACRSVCGDGGSGGDGLFHRQYGHYPNYMANTQSFRAKLRSHSAPKQRPEPKRRVSLNELLECRSSLSGVRMQRSCSQVQEAINFKNAVMGKLEKSGEFGREGRDSNYWQRRW 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2102 470 ProSiteProfiles IQ motif profile. 142 170 IPR000048 GO:0005515
Acco02g2102 470 SMART iq_5 141 163 IPR000048 GO:0005515
Acco02g2102 470 SMART iq_5 164 185 IPR000048 GO:0005515
Acco02g2102 470 Gene3D - 140 192 - -
Acco02g2102 470 ProSiteProfiles IQ motif profile. 166 193 IPR000048 GO:0005515
Acco02g2102 470 MobiDBLite consensus disorder prediction 245 294 - -
Acco02g2102 470 PANTHER IQ-DOMAIN 5-RELATED 38 416 - -
Acco02g2102 470 MobiDBLite consensus disorder prediction 279 294 - -
Acco02g2102 470 Pfam Protein of unknown function (DUF4005) 337 425 IPR025064 -
Acco02g2102 470 MobiDBLite consensus disorder prediction 245 265 - -
Acco02g2102 470 Pfam IQ calmodulin-binding motif 169 183 IPR000048 GO:0005515
Acco02g2102 470 Pfam IQ calmodulin-binding motif 143 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2102 Acco-ChrAcco02 17496916 17499153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2102 38 429 IQD Protein Family AT3G16490 50.125 1.36e-94 289