Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2100 ATGGGGAACAAAATTGCGCGCACAACTCAAGTTTCGTCTTCAGAGTACTATCTTCATAACCTACCCTCCACCTACAATCTCGTGTTGAAGGAGATTTTAGGTCGAGGCCGTTTCTTCAAGTCTATTCAGTGCAAGCATGACGAGGGTTTGGTTCTGGTCAAGGTTTATTTCAAGCGTGGCGACTCCATCGATCTCAGAGAGTATGAACGGCGTCTGACTCAGATTAGAGACATTTTCAGTGGCATTGATCACCCCCACGTTTGGCCCTTCCAGTTTTGGCAGGAAACAGACAAAGCAGCATATCTCTTGAGGCAATATTTCTTCCATAATCTGCATGATCGACTTAGTACTCCACCTTTTCTCAGTCTTATTGAGAAGAAATGGTTGGCTTTTCAGTTGCTCCAAGCTGTGAAACAGAGCCATGAGAAGGGAGTATGCCATGGTGATATAAAGTGTGAGAATGTGCTGATTACGTCCTGGAATTGGCTTTACCTTGCGGACTTTGCATCCTTCAAGCCCACTTACATCCCATATGATGACCCTTCAGATTTTTCTTTTTTCTTTGACACGGGTGGAAGGAGACTCTGTTATCTAGCACCTGAGAGGTTTTATGAACATGGAGGGGAGACGCAAGTGGTACAAGATGCTTCACTAAAGCCATCTATGGATATATTTGCAGTTGGGTGTGTAATCGCCGAACTTTTCCTTGAGGGACAACCACTGTTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGACACTATGATCCTAGCCAACATCTTGAGAAGATACCAGATCCTGGAGTCCGTAAAATGGTATTGCACATGATTCAACTGGAACCAGAGTCACGGTTTTCTGCTGAAAGTTACCTGAAAGAATATGCACCAGTTGTGTTCCCACCCTATTTCTCACCATTTTTGCATGATTTTTACCGTTGTTTGAATCCTCTTCATTCTGATATGAAGGTTTTGTTATGTCAAAGAGCTTTCCAAGAGATACTAAAACAAATGATGAACAGTAAATCATTTGAAGACGTGGCTGCTACTTCTGGTGAGCTATTGGGAGAGGTTGTTGGTAAAGAAAATGTTGATTTTATGAAGGACTCCCTGATAAAGAGAGATGAGATGGGAAGCGGGCTAATTCCTGATCACTATGAACGCCTATTGAAGGGTGCTAAGAATCATGGTCATCTATCTGGTCGCCAGCATGTGATAGGAAATGCCCCCAATTCCACCCTTTCTGAGAATCTTAAAAATTTGCAATCTTCTGGTGAGCTCCTTCAAACTATCTCCAATGCATTCCAAGGAAATGGCCATCCCTTTTTGAAGAACATTACAATGAATGATTTGAATTCATTGATGTCTGACTATGATAGTCAATCAGATACTTTTGGGACCCCTTTCTTACCACTACCAAAGGATACCATGAGATGTGAAGGCATGGTTTTGATTACTTCTTTGCTCTGCTCCTGCACTCGCAATATCAAGTTGCCTCAATTGAGGAGGGCGGCTGTGCTCTTATTGAAGGCTTCTGCATTATATACTGATGATGAAGATCGTCTGCAGCGTGTTATCCCATATGTTATTGCAATGCTTTCTGATCCTTCAGCAATTGTGCGTTGTGCTGCTTTAGAGACTCTGTCTGATATTCTGCCCCTTGTCCGACATTTGCCACCCAGCGATGCTAAGATATTTCCTGAATACATACTGGCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGTTATGCGAGTAATATAGCTAAGCTGGCACTTACTGCTTATGGATTCTTGATACACACAAAAAGTTTGAGTGAGGCAGGTGTACTTGATGAAATGAGTTCACCACACAAGTCATGGATATCATTTAGCGAGACTAGTGGAAGATTGGAGGGGATAAATGGTGATGTACAACTTTTGAAGCTGAGGAAATCAATTGCAGAGGTTGTCCAAGAACTTGTCATGGGTCCAAAGCAAACACCAAATATTAGAAGAGCACTCCTTCAGGACATTGGGAAGTTGTGTTATTTCTTCGGTCAGAGGCATAGTAATGATTTCCTGTTACCCATTCTCCCTGCTTTCCTTAATGATCGGGATGAACAACTACGGTCTGTGTTCTATGAGAAGATCGTATATGTTTGCTTTTTTGTGGGCGAAAGAAGTGTAGAAGAATATCTTTTACCTTACATTGAGCAGGCTTTGAGTGACACAACAGAGGCTGTCATTGTAAGGGCCTTAGATTGTTTGACCATTCTTTGCAGAAGTGGTTTCTTCAGGAAGAGGATACTTCTTGAAATGATAGAGCGTGCATTTCCTTTACTTTGTTATCCTAGTGAATGGGTGCGTAGGTCAGTGGTCTCATTCATTGCTGCTAGCAGTGAGAGCTTGGGTGCGGTAGATTCTTATGTTTATCTTGCTCCTGTTATACAACCCTTCCTCCGCAGACAACCTGTATCTCTAGCTTCTGCATCAGCCCTTTTTTCTTGTTTAAAGCCTCCTGTCTCAAGACAGATTTTCCATGAAGTATTGGAGAACTCTAGGAGTTCAGACATGTTAGAAAGACAAAGAAAGATATGGTATAGTTCATCATCACAATCTAAACTATGGGAATTGGAATCACTGAGAAAAGGAATAGATGAGTTGGACTCATTGAAGAACTGGCCTGACAAGCAACAAGGTCCTGGGGTTCAGCAATCTATTGGCACTAGCTTTCAACAGCCAGGGCCAACTGATTGTGATGAGGCTGACACAAAATTGAGAAATATGGGCGCCTTTATGCATAATGATTGCAGTATGATAGGACATCGTGATCCCCAATGCTTGGAGAAGTTACAGTTCTCTGGGTTGATGTCACCTCAGGTTAGTTGTAGTAGTTTGCCATATGAGAAGTCATCGAATGGCATACCTCTGTATTCTTTCAGTGTGGATAGGCGGGCAATGGGAATTCCTCCTGCAGCATCTGATTCTCCACTACAAATGAATTCTCTAGGTATCAGTTCATCCACCATGCCTTGGGTTAGTCCAGTTAGCAAGTCCTTTAATTTGGCTTGTTCAGTTCCGGCTCCAAAGTTTGTTTCAGGTTCTTTTAGCATCAGCGGTGGATCTAAACAGTTCTATCGAGTGGTGCATGAACCAGATGGTAGGGAAAATGAGACAGCCTATATTAATAGCAAAACTCAAGATGTAGGATTATCCACTGATAGCAAAGGTAGTTCGATCTCACTTGAAGATGCAACCAGCCAAACTGATGCATCAGGATTTTCTTTTGCTGGAACGTCCATTCCTGACTCTGGTTGGAGGCCCCGTGGGGTTTTGATTGCTCACCTCCAAGAGCACCGTTCATCTGTGAATCACATAGCAATTTCTACTGATCATAGCTTCTTTGTGAGCACATCTGATGACTCTATGGTCAAGATATGGGATTCTAGGAAGCTGGAAAAAGATATTTCGTTCAGGTCTAGGCTAACTTACCATTTGGATAGAAGCCGAGCACTATGTGCAACAATGCTTCGGGGTTCTGCGCAAGTAGTTGTTGGAGCATGTGATGGATTAATTCATATGTTTTCCATTGATCATATCTCTAGGGGTGTAGGAAATGTGGCTGAGAAGTATTCCGGTGTTGCTGACATCACAAAGAAGGATGTAAAGGAAGGTGCCATCCTCAACCTATTGAACTACCCAGTGGATGCTTATACCATCATGTTTAGCACTCAGAACTGTGGTATTCATCTATGGGATACTAGGTCAAGTTCCAGTTCATGGACTCAAAAAGTTAATCCTGAGCAGGGCTATATTCCTTCTTTGGTAGTAGGGCCTTGTGGTAATTGGTTTGTTTCAGGTTCTTCCAGGGGTGTACTTACTCTTTGGGATCTGAGATTTCTGATACCTGTGAACTCTTGGCAGTATTCCCTTGCTTGTCCTATAGAAAAGATGTGTCTCTTCCTTCCTCCTTCAAATGCCTCTCTATCTTCAACTATGAGGCCCCTTGTTTATGTGGCTGCAGGTAGCAATGAAGTGTCTCTTTGGAATGCAGAGAATGGTAGCTGCCACCAGGTATTGAAAGTGACCAATTACGACAGTGATGCTGAAAAGTCTGAACTGCCATGGGCCTTGGCTAGACCTTCTAACAAGGGAACTGCTAAACCAGATTTGAGGCGGAACGTCAATCCCAAGTATAGAGTAAATGAGCTAAATGAACCTCCACTCCGTCTTCCTGGTATTCGTTCATTGCTTCCCTTGCCAGGGGGTGATTTAATGACTGGGGGTACTGACTTAAAGATACGTCGATGGGATCACTACAGTCCTGACAAAAGTTACTGTTTATGTGGACCTGTCTTGAAAGGAGTGGCAAACGATGATTTCTATGACAAAAAATCTAGTTTTGGCGTGCAAGTTGTACAGGAGACAAAGAGACGCCCCCTTTCAAATAAGTTGACAGCAAAGGCAGTTGTCACGGCTGCTGCCACCGATCCCGCAGGTTGCCACCGTGATTCTATCCTTTCTTTGGCTTCTGTTAAGCTAAACCAGAGACTCTTGTTATCAAGCAGTAGAGACGGAGTGATCAAGGAGCTAACCCTTTAG 4596 0.4308 MGNKIARTTQVSSSEYYLHNLPSTYNLVLKEILGRGRFFKSIQCKHDEGLVLVKVYFKRGDSIDLREYERRLTQIRDIFSGIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTPPFLSLIEKKWLAFQLLQAVKQSHEKGVCHGDIKCENVLITSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGETQVVQDASLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGHYDPSQHLEKIPDPGVRKMVLHMIQLEPESRFSAESYLKEYAPVVFPPYFSPFLHDFYRCLNPLHSDMKVLLCQRAFQEILKQMMNSKSFEDVAATSGELLGEVVGKENVDFMKDSLIKRDEMGSGLIPDHYERLLKGAKNHGHLSGRQHVIGNAPNSTLSENLKNLQSSGELLQTISNAFQGNGHPFLKNITMNDLNSLMSDYDSQSDTFGTPFLPLPKDTMRCEGMVLITSLLCSCTRNIKLPQLRRAAVLLLKASALYTDDEDRLQRVIPYVIAMLSDPSAIVRCAALETLSDILPLVRHLPPSDAKIFPEYILAMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHTKSLSEAGVLDEMSSPHKSWISFSETSGRLEGINGDVQLLKLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRHSNDFLLPILPAFLNDRDEQLRSVFYEKIVYVCFFVGERSVEEYLLPYIEQALSDTTEAVIVRALDCLTILCRSGFFRKRILLEMIERAFPLLCYPSEWVRRSVVSFIAASSESLGAVDSYVYLAPVIQPFLRRQPVSLASASALFSCLKPPVSRQIFHEVLENSRSSDMLERQRKIWYSSSSQSKLWELESLRKGIDELDSLKNWPDKQQGPGVQQSIGTSFQQPGPTDCDEADTKLRNMGAFMHNDCSMIGHRDPQCLEKLQFSGLMSPQVSCSSLPYEKSSNGIPLYSFSVDRRAMGIPPAASDSPLQMNSLGISSSTMPWVSPVSKSFNLACSVPAPKFVSGSFSISGGSKQFYRVVHEPDGRENETAYINSKTQDVGLSTDSKGSSISLEDATSQTDASGFSFAGTSIPDSGWRPRGVLIAHLQEHRSSVNHIAISTDHSFFVSTSDDSMVKIWDSRKLEKDISFRSRLTYHLDRSRALCATMLRGSAQVVVGACDGLIHMFSIDHISRGVGNVAEKYSGVADITKKDVKEGAILNLLNYPVDAYTIMFSTQNCGIHLWDTRSSSSSWTQKVNPEQGYIPSLVVGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQYSLACPIEKMCLFLPPSNASLSSTMRPLVYVAAGSNEVSLWNAENGSCHQVLKVTNYDSDAEKSELPWALARPSNKGTAKPDLRRNVNPKYRVNELNEPPLRLPGIRSLLPLPGGDLMTGGTDLKIRRWDHYSPDKSYCLCGPVLKGVANDDFYDKKSSFGVQVVQETKRRPLSNKLTAKAVVTAAATDPAGCHRDSILSLASVKLNQRLLLSSSRDGVIKELTL 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2100 1531 Gene3D - 1156 1316 IPR015943 GO:0005515
Acco02g2100 1531 CDD STKc_Vps15 16 303 - -
Acco02g2100 1531 MobiDBLite consensus disorder prediction 895 915 - -
Acco02g2100 1531 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 470 609 - -
Acco02g2100 1531 ProSiteProfiles Trp-Asp (WD) repeats profile. 1114 1146 IPR001680 GO:0005515
Acco02g2100 1531 Pfam WD domain, G-beta repeat 1110 1146 IPR001680 GO:0005515
Acco02g2100 1531 SMART WD40_4 1256 1295 IPR001680 GO:0005515
Acco02g2100 1531 SMART WD40_4 1155 1194 IPR001680 GO:0005515
Acco02g2100 1531 SMART WD40_4 1402 1436 IPR001680 GO:0005515
Acco02g2100 1531 SMART WD40_4 1107 1146 IPR001680 GO:0005515
Acco02g2100 1531 SMART WD40_4 1484 1530 IPR001680 GO:0005515
Acco02g2100 1531 ProSiteProfiles HEAT repeat profile. 524 554 IPR021133 -
Acco02g2100 1531 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2100 1531 FunFam Protein kinase family protein / WD-40 repeat family protein 620 830 - -
Acco02g2100 1531 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1114 1146 - -
Acco02g2100 1531 Gene3D - 420 611 IPR011989 -
Acco02g2100 1531 SUPERFAMILY WD40 repeat-like 1111 1527 IPR036322 GO:0005515
Acco02g2100 1531 ProSiteProfiles HEAT repeat profile. 692 730 IPR021133 -
Acco02g2100 1531 SUPERFAMILY ARM repeat 272 819 IPR016024 -
Acco02g2100 1531 Gene3D Transferase(Phosphotransferase) domain 1 22 363 - -
Acco02g2100 1531 Gene3D - 1072 1155 IPR015943 GO:0005515
Acco02g2100 1531 Pfam HEAT repeat 524 552 IPR000357 GO:0005515
Acco02g2100 1531 ProSiteProfiles Protein kinase domain profile. 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2100 1531 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1527 IPR045162 GO:0004674|GO:0016236|GO:0045324
Acco02g2100 1531 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Acco02g2100 1531 Gene3D - 1320 1528 IPR015943 GO:0005515
Acco02g2100 1531 Gene3D - 635 836 IPR011989 -
Acco02g2100 1531 SUPERFAMILY Protein kinase-like (PK-like) 26 327 IPR011009 -
Acco02g2100 1531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Acco02g2100 1531 MobiDBLite consensus disorder prediction 894 917 - -
Acco02g2100 1531 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2100 Acco-ChrAcco02 17465493 17480819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2100 31 242 AGC Kinase Gene Family AT3G08730 25.676 2.11e-11 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Acco02g2100 Pkinase 6.5e-21 CL0016