Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2087 ATGGAGAAGGCCTGGATGATTCTGGCTTTTGATCTCCTCATTCTCCTCCATCTGGGTGCGGCAAGAGCAGCTTTAGGAGTCGGCGGTGGCATTGGCGTAGGTGTCGGTGTTGGCGGCGGCGGAGTGGTTTGGGTCGGCGGCGGGGGGAGTAACGGCTCGCCGGAGTCTCCTTCAGCGCCGAAGCAAGACAAAGCTTACATTGCTCTCCAGGCGTGGAAAGCAGCGATAACAGAGGACCCGTTGAGGATTCTGGAGAGTTGGAATGGTTCTAATGTGTGTTCTTATAAAGGTGTGTTTTGTGCCAACCCTGAGGATGCTTCCGGCGAGCCAGTGGTCGCCGGAATAGATCTCAACCACGCGAATCTGAGAGGAGGTCTTGTAAAAGAGCTCTCTTTACTCACTGGAATGTCTCTTCTTCACCTCAACAGTAATAGATTTACAGGTACAGTTCCTGATACATTCAGAGACCTCTCGTCTCTTGAAGAGTTAGACCTCAGCAACAACCAGCTCTCTGGTCCTTTCCCCACAGTGACCTTATCAATGCCCAGTCTGGTTTACTTGGACATCAGATTCAACTCTTTCTCTGGGACACTCCCGGATGATCTTTTCAACAAGAACCTGGATGCTATTTTCCTCAACAACAATCAATTCGAAGGCGAAATCCCCCAAAATTTGGGCAATTCCCCTGCTTCAGTCATCAATTTAGCTAACAACAAGTTCAGTGGAAGCATCCCAGCGAGTTTTGGCTTCATGGGTTCTAAGCTGAAAGAGATTCTCTTCCTCAATAATCAATTAACTGGGTGTATTCCCGAAGGGGTTGGGATCTTCACACAGATGCAAGTTCTTGATGTGAGCTACAATTCACTAATGGGTCATTTGCCTGACACAATTTCTTGTCTTCAAGACATACAAGTTCTGAATTTGGCACATAACAAGCTATCTGGGGAATTATCGGATGTGATCTGCTCACTGAGAAGTCTGTTGAATCTAACAGTTGCGTATAATTTCTTTTCTGGGTTCAGCCAGGAATGCTCGAGGCTTTTCGTTAGGAATGTGGGTTTTGATTTCTCAGATAATTGCATTCCTGGGAGGGACATGCAGAGACCTCAACCGCAGTGTTCTGTGATCCCGGGTGGTGGCTTGAATTGTCTCAGAATCCCCACTCCTAAGCTTGTTTGTGGTGCGCTTTCTGTAAGTTTCTCTAAGCAAACCCACCCCATTCCATCTCCTTCTTCTTCTTCTTCTTCTTCTTCACCTTGA 1260 0.4746 MEKAWMILAFDLLILLHLGAARAALGVGGGIGVGVGVGGGGVVWVGGGGSNGSPESPSAPKQDKAYIALQAWKAAITEDPLRILESWNGSNVCSYKGVFCANPEDASGEPVVAGIDLNHANLRGGLVKELSLLTGMSLLHLNSNRFTGTVPDTFRDLSSLEELDLSNNQLSGPFPTVTLSMPSLVYLDIRFNSFSGTLPDDLFNKNLDAIFLNNNQFEGEIPQNLGNSPASVINLANNKFSGSIPASFGFMGSKLKEILFLNNQLTGCIPEGVGIFTQMQVLDVSYNSLMGHLPDTISCLQDIQVLNLAHNKLSGELSDVICSLRSLLNLTVAYNFFSGFSQECSRLFVRNVGFDFSDNCIPGRDMQRPQPQCSVIPGGGLNCLRIPTPKLVCGALSVSFSKQTHPIPSPSSSSSSSSP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2087 419 Gene3D Ribonuclease Inhibitor 229 348 IPR032675 -
Acco02g2087 419 PRINTS Leucine-rich repeat signature 160 173 - -
Acco02g2087 419 PRINTS Leucine-rich repeat signature 300 313 - -
Acco02g2087 419 SMART LRR_typ_2 300 324 IPR003591 -
Acco02g2087 419 SMART LRR_typ_2 157 180 IPR003591 -
Acco02g2087 419 SMART LRR_typ_2 181 205 IPR003591 -
Acco02g2087 419 SMART LRR_typ_2 133 156 IPR003591 -
Acco02g2087 419 FunFam Leucine-rich repeat receptor protein kinase EMS1 244 343 - -
Acco02g2087 419 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 56 415 - -
Acco02g2087 419 FunFam Leucine-rich repeat extensin-like protein 1 66 227 - -
Acco02g2087 419 SUPERFAMILY L domain-like 67 361 - -
Acco02g2087 419 Gene3D Ribonuclease Inhibitor 63 228 IPR032675 -
Acco02g2087 419 Pfam Leucine rich repeat N-terminal domain 68 100 IPR013210 -
Acco02g2087 419 Pfam Leucine rich repeat 138 193 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2087 Acco-ChrAcco02 17379314 17380573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2087 60 376 Leucine-rich Repeat extension Gene Families AT3G24480 52.366 3.55e-108 326