Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2073 ATGACAATGTCGATCAGATTCATCTCCTTGCCGATGATGCTTCATCTTGTTCTTATGGTTCCAGTTCTTGGACAGAGACAGACAGGCTTCATCAGTATTGATTGTGGAGGTGCAGAGAATTTTGAATACACAGATGATAGCGATCAAATAAAGTACAGCACAGATGGGGCCTACATACAAACAGGGGTTAACAAAAACATATCAACAAAATACTCATATCCAAACAATCCCAATCTACCATTACCAATGTCACATCTCAGAAGTTTCCCCAAGGGAAAGTGGAATTGTTACACATTAAGAGCTGGACGAAGAGGAAGCTTACATTTGATAAGGGCCTATTTTTTGTATGGAAACTACGATGGAGAAAACAAGCTTCCACAATTTGATCTCTATATTGGTGTCAATTTCTGGTCCTCAGTGAGTTTCAAAAATGTTTCAGAGCAAGTTACACTGGAAATTATCAGCATGGCAGAATCAGAGGTGACTAATGTTTGTCTTGTGAACAAAGGACTGGGAACTCCTTTTATCTCAGCTTTAGAACTAAGACCAGTCAATAGTTCTATTTATAATACTGAGTTTGGGCCATCTGCTTCACTGTTACTTTTCAAAAGATGGGACTTTGGAGCAATTATTAATCGTAGTGGTAGATACGAAGATGACATATATGACAGAATTTGGTACCCGTATGGCTCGTCTTCCTGGGATTCTATAAGCACTTCTCATGCTATAAATGGCAATAACAATGGCTATAGAACACCATTTGAAGTGATGAGAACTGCTGCAAAACCCAAGAATGCTAGTGCTTCTTTGGAATTCTCTTGGACCCCAAACGATCCAAATTCAAAATTTTATGTCTACTTGTATTTTGCTGAAGTGAAGCCGCTTGAGATTAAACAACTAAGGAAATTCACTATATCCTGGAATGGACATTTATTGTATAGACAATTAGTCCCAAGCTACTTAGTTGCAGCTGCAGTATCGAATTTGAAACCTTTGATGGGACATGAACATCGAATTTCTCTTCATAGAACCGAAGACTCAAGCCTTCCGCCTATCCTTAACGCAGTTGAGATATTTGAAGTTAGGATGATGGATGCATTTCCAACATTTGAGAAAGATGTAAACGCTATTATGGATATCAAAGAGGCATATGCAATTCAAAGAAACTGGGTGGGTGATCCGTGTGAGCCAAAGAACCTCACTTGGGAAGGCATAATTTGTAACTACAGCAATTCACATCCTCCACAAATTGTATCTCTGAATCTGAGCTCAAGCAGTTTGAGTGGGATGATTGCTTCTGCTGTCTGCAACCTCTTATCACTTGAATCATTGGATTTATCAAACAATAGCTTATCTGGGTCAATTCCGAAGTTTCTGGCAGAAATGAGATCTCTTAAAATTTTGATTTTGAAAGGCAACCAATTGTCAGGGTTTATCCCTGCAGCTCTTCTGAAAAAATCAAGGGCAGGATTGCTTAAACTGAGTGTGGATGCCCAGAATCTTCGTGGCTCAGATAAGTGTGAGAAGAAGCTAAATGTATTCGTTCCCATAGTTGCTACAACATCATCACTTCTTGTTCTTCTGATTGTTTTCGTTATCATCTGGAAAGTTAGAAGAAATATGCAACCAGCCAAAGACAAGGAAACAAGTAATCCCGTCAAAGAAGGAACACGTGTTGCATCAAAGAAGTGGCAATATAGTTATGCAGAGGCATTGGACATCACCAACAACTTTAAAATTGTCATTGGGAAGGGGGGATTTGGGACTGTGTACCGTGGTCAGATGAAAGATGGGAACCAAGTTGCAGTAAAGATGCTTTCCCCAACATCATCTCAAGGGCCAAGGGAATTCCAGACTGAGGCTGAGCTCTTGATGACAGTCCATCACAAAAATTTGGTTGCCTTCATTGGTTTTTGTGACGATGGAAACAAAATGGCACTCATATATGAGTACATGGGAAATGGAAACCTCAAAAACTATCTTTCAGCAAGAAATTCACGTTGCTTGAGTTGGGGAAGGAGACTTCAGATAGCAATTGATGCTGCACAGGGATTGGAGTATTTACACCATGGATGCAAACCACCTATAATACATAGAGATGTGAAGACGGCCAATATTCTTCTAAGTGAAAAGCTGGAAGCTAAAATAGCAGATTTTGGCCTCTCCAAGGTGTTTAAAAATGAAACTAGAGATGTAGGATCCTCAATGAATACAAATGATCAAGGAAATTCAGAACCTGCTGTTATGGGTACCAAAGGATACCTTGACCCAGAATACTACAAATCAAGGAAGCTGAATGAGAAAAGTGATATCTATAGCTTTGGAATTGTTCTGTTGGAGCTAATTACCGGTCAACCTGCTGTACTAAAGGGAAAGGAATCAGTTCACATACTTGATTGGTTAAGACCTGAACTTCGAAGAGGAGATCTGAGCAAAATTATAGATCCAAAGCTGCAAGGTAAATACAATGCATGTTCTGTTTGGAAGGCTTTAGGAGCAGCAATGGCATGTACTGCTTCAGCCTCTATTCATAGACCTACAATGAGTTGTGTGTTATCTGAGCTAAAAAAGTGTTTGGAAACAGAGGTGCCTGGCCAGAGTGAAACATATATGGTACCACCACAGATCTATAGGGAGTTGCATGATTTGTCTGAGACATATTCCATGGATGATGAATCTATCACCTATCCTTTTCCAAGATAG 2703 0.3966 MTMSIRFISLPMMLHLVLMVPVLGQRQTGFISIDCGGAENFEYTDDSDQIKYSTDGAYIQTGVNKNISTKYSYPNNPNLPLPMSHLRSFPKGKWNCYTLRAGRRGSLHLIRAYFLYGNYDGENKLPQFDLYIGVNFWSSVSFKNVSEQVTLEIISMAESEVTNVCLVNKGLGTPFISALELRPVNSSIYNTEFGPSASLLLFKRWDFGAIINRSGRYEDDIYDRIWYPYGSSSWDSISTSHAINGNNNGYRTPFEVMRTAAKPKNASASLEFSWTPNDPNSKFYVYLYFAEVKPLEIKQLRKFTISWNGHLLYRQLVPSYLVAAAVSNLKPLMGHEHRISLHRTEDSSLPPILNAVEIFEVRMMDAFPTFEKDVNAIMDIKEAYAIQRNWVGDPCEPKNLTWEGIICNYSNSHPPQIVSLNLSSSSLSGMIASAVCNLLSLESLDLSNNSLSGSIPKFLAEMRSLKILILKGNQLSGFIPAALLKKSRAGLLKLSVDAQNLRGSDKCEKKLNVFVPIVATTSSLLVLLIVFVIIWKVRRNMQPAKDKETSNPVKEGTRVASKKWQYSYAEALDITNNFKIVIGKGGFGTVYRGQMKDGNQVAVKMLSPTSSQGPREFQTEAELLMTVHHKNLVAFIGFCDDGNKMALIYEYMGNGNLKNYLSARNSRCLSWGRRLQIAIDAAQGLEYLHHGCKPPIIHRDVKTANILLSEKLEAKIADFGLSKVFKNETRDVGSSMNTNDQGNSEPAVMGTKGYLDPEYYKSRKLNEKSDIYSFGIVLLELITGQPAVLKGKESVHILDWLRPELRRGDLSKIIDPKLQGKYNACSVWKALGAAMACTASASIHRPTMSCVLSELKKCLETEVPGQSETYMVPPQIYRELHDLSETYSMDDESITYPFPR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2073 900 SUPERFAMILY Protein kinase-like (PK-like) 561 855 IPR011009 -
Acco02g2073 900 ProSiteProfiles Protein kinase domain profile. 576 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2073 900 PANTHER OS07G0107800 PROTEIN-RELATED 31 859 - -
Acco02g2073 900 Gene3D Transferase(Phosphotransferase) domain 1 653 871 - -
Acco02g2073 900 CDD STKc_IRAK 582 857 - -
Acco02g2073 900 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Acco02g2073 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Acco02g2073 900 SMART serkin_6 576 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2073 900 Gene3D Phosphorylase Kinase; domain 1 582 652 - -
Acco02g2073 900 FunFam Leucine-rich repeat receptor-like protein kinase 554 651 - -
Acco02g2073 900 Gene3D Ribonuclease Inhibitor 373 490 IPR032675 -
Acco02g2073 900 FunFam Leucine-rich repeat receptor-like kinase 372 504 - -
Acco02g2073 900 ProSiteProfiles Leucine-rich repeat profile. 440 462 IPR001611 GO:0005515
Acco02g2073 900 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 867 - -
Acco02g2073 900 Pfam Protein tyrosine and serine/threonine kinase 580 791 IPR001245 GO:0004672|GO:0006468
Acco02g2073 900 Pfam Malectin-like domain 33 361 IPR024788 -
Acco02g2073 900 Pfam Leucine rich repeat 416 475 IPR001611 GO:0005515
Acco02g2073 900 SUPERFAMILY L domain-like 388 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2073 Acco-ChrAcco02 17235937 17240106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2073 3 879 Receptor kinase-like Gene Family AT4G29180 49.496 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco02g2073 Malectin_like 1.5e-105 CL0202