Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g2066 | ATGGGGAGGAGAATTCTGAATGACGCACTGAGAACTATGGTGAATGCAGAGAGGAGGGGGAAAGCTACTGTTGAGTTAAAGCCCATCTCCACTGTCATATCCTCTTTTCTCAGGATCATGAAAGTCCGAGGTTATATCAAGGATTTTGAAGTCTTTGATCCTCATAGAGTGGGGAGGATAACAGTTCAACTTCAAGGCAGGATTAATGATTGCAGAGCCCTTACATACCGACAAGATATCAAGGCAGCAGACATTGAAAAATACAGATTGAAAACTCTCCCAACGCATCAGTGGGGTTATGTTGTGATTACAACCCCTGAAGGCGTTTTGGATCATGAGGAGGCCATGGAGCGGAACGCAGGTGGTCAAGTTCTTGGTTACTTTCACTAG | 390 | 0.4487 | MGRRILNDALRTMVNAERRGKATVELKPISTVISSFLRIMKVRGYIKDFEVFDPHRVGRITVQLQGRINDCRALTYRQDIKAADIEKYRLKTLPTHQWGYVVITTPEGVLDHEEAMERNAGGQVLGYFH | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g2066 | 129 | PANTHER | 40S RIBOSOMAL PROTEIN S15A | 1 | 128 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
| Acco02g2066 | 129 | FunFam | 40S ribosomal protein S15a | 1 | 68 | - | - | |
| Acco02g2066 | 129 | Gene3D | - | 69 | 129 | - | - | |
| Acco02g2066 | 129 | Gene3D | - | 2 | 68 | - | - | |
| Acco02g2066 | 129 | SUPERFAMILY | Ribosomal protein S8 | 3 | 129 | IPR035987 | GO:0003735|GO:0005840|GO:0006412 | |
| Acco02g2066 | 129 | Pfam | Ribosomal protein S8 | 6 | 127 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g2066 | Acco-ChrAcco02 | 17154543 | 17155543 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g2066 | 1 | 129 | Cytoplasmic Ribosomal Protein Gene Family | AT4G29430 | 79.845 | 6.54e-79 | 227 |