Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2051 ATGAAGCGTCAAGTAGTAGTAGTGAGAAAAACTGAAGGTGGAAGAGGTTCGAGCAGGAGTACTAGTGCTAGGTATGGAGAGTGTCAGAAGAATCATGCGGCAAATTCCGGCGGATACGCCGTTGACGGTTGCCGAGAATTCATAGCCTCTGGGGAGGAAGCAAATGCTGCTCTTACATGTGCTGCCTGTGGATGCCACAGAAACTTCCACAAGAGATTGGTGGACACTTCTTCTACTACTGATGAGTCCTCTTCACTTCCTCTAAATTAA 270 0.4741 MKRQVVVVRKTEGGRGSSRSTSARYGECQKNHAANSGGYAVDGCREFIASGEEANAALTCAACGCHRNFHKRLVDTSSTTDESSSLPLN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2051 89 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 72 IPR006456 -
Acco02g2051 89 Pfam ZF-HD protein dimerisation region 23 73 IPR006456 -
Acco02g2051 89 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 18 76 - -
Acco02g2051 89 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 73 IPR006456 -
Acco02g2051 89 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2051 Acco-ChrAcco02 16969439 16969708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2051 2 85 Zinc finger-homeobox gene family AT1G18835 60.714 1.97e-29 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Acco02g2051 ZF-HD_dimer 1.5e-26 No_clan