Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2049 ATGACTCTTCGTCATGTCGGAGGAGCACAGCTCTTGATCTGCAAAATGGTTCAGCGGCTTACATACCGTAAGCGTCACAGCTACGCTACTAAATCCAATCAGCACAGGGTCGTCAAAACCCCTGGTGGCAAGTTGGTGTATCAGACTACAAAGAAGAGAGCGAGCGGACCGAAGTGCCCTGTAACTGGGAAGAGGATCCAAGGGATTCCACACTTGAGACCTGCTGAATACAAGAGATCTAGATTGTCTAGGAACCGTCGGACGGTTAACCGGGCTTATGGAGGTGTATTATCGGGAGGTGCTGTGAGAGAAAGGATAATCCGGGCGTTCTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTATTGAAGATCCAGAAGGCAAAAGAAAAGCAAGCATCAAGGAGTTAA 408 0.4779 MTLRHVGGAQLLICKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2049 135 Gene3D - 54 135 - -
Acco02g2049 135 ProSitePatterns Ribosomal protein L34e signature. 30 43 IPR018065 -
Acco02g2049 135 Gene3D - 16 52 - -
Acco02g2049 135 PRINTS Ribosomal protein L34 signature 28 41 IPR008195 GO:0003735|GO:0005840|GO:0006412
Acco02g2049 135 PRINTS Ribosomal protein L34 signature 81 103 IPR008195 GO:0003735|GO:0005840|GO:0006412
Acco02g2049 135 PRINTS Ribosomal protein L34 signature 41 58 IPR008195 GO:0003735|GO:0005840|GO:0006412
Acco02g2049 135 PRINTS Ribosomal protein L34 signature 59 69 IPR008195 GO:0003735|GO:0005840|GO:0006412
Acco02g2049 135 PANTHER 60S RIBOSOMAL PROTEIN L34 16 131 IPR008195 GO:0003735|GO:0005840|GO:0006412
Acco02g2049 135 Pfam Ribosomal protein L34e 16 111 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2049 Acco-ChrAcco02 16942748 16947481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2049 16 134 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 91.597 5.90e-76 219