Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2039 ATGGCCTTCCCTCCCCACTCCTTCCTGTTTCAGACCCACGAAGATCACGATCACCTCCCTTCCACCTCCATCAACGCCTACACCTCCTTCACACCCAAGCTCTTCGAAGGGGGTGCAGTGCCTTTGATGTTGAAGAGATCGATGTCATTTTCAGGGATCGAGAACAAGCATGAGGACGATGAGCTTTCCGACGACGGATCTCAGATGATGATGGGGGAAAAGAAGAAGAGGCTGAACATGGGGCAAGTGAAGGCACTGGAAAAGAGCTTCGAGTTAGGGAACAAGCTTGAGCCTGAACGCAAAATGCAGCTAGCTAAGGCTCTGGGACTTCAGCCAAGGCAGATCGCTATTTGGTTCCAGAATAGGAGGGCCAGATGGAAAACCAAGCAGCTCGAAAAGGAATATGAAGCTCTCAAGAAGAAGTTTGAAGCTCTAAAAGCTGATAATGATGCCCTTAAGGCTCATAACCACAAATTACGCGCTGAGTTATTGGCTCTAAAGGGGAGAGATTGCTGTGAAGGAGGAATTATGAACCTTAAGAAAGAACCTGAAATTTGTTGGACCAATGGGAGTACTGAGAATAGTTCGGACATTAACTTGGATCTCTCGAGATCACAATTTATAAACAGTACAGTAAATTCAGTACACAATGGTAAAAGCCTTCTTCCCTCTAGTAATGCCCTTAAGCCAGCCAGCATGACCCAGCTCCTCCAATGCTCTTCAAGATCAGAACTCCAAGATGACAGCTTCTCCAACATGTTTCAAAGCGGCGACGGCGTCGATGAGCACCACAATTTCTGGCCCTGGCCAGAGCACGGCAGCCACCACTTTCATTGA 837 0.4779 MAFPPHSFLFQTHEDHDHLPSTSINAYTSFTPKLFEGGAVPLMLKRSMSFSGIENKHEDDELSDDGSQMMMGEKKKRLNMGQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKKKFEALKADNDALKAHNHKLRAELLALKGRDCCEGGIMNLKKEPEICWTNGSTENSSDINLDLSRSQFINSTVNSVHNGKSLLPSSNALKPASMTQLLQCSSRSELQDDSFSNMFQSGDGVDEHHNFWPWPEHGSHHFH 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2039 278 Gene3D - 66 140 - -
Acco02g2039 278 PRINTS Lambda-repressor HTH signature 100 109 IPR000047 GO:0003677
Acco02g2039 278 PRINTS Lambda-repressor HTH signature 109 125 IPR000047 GO:0003677
Acco02g2039 278 CDD homeodomain 74 130 IPR001356 GO:0003677
Acco02g2039 278 SMART HOX_1 72 133 IPR001356 GO:0003677
Acco02g2039 278 FunFam Homeobox-leucine zipper protein ATHB-13 64 133 - -
Acco02g2039 278 Coils Coil 121 162 - -
Acco02g2039 278 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 46 217 IPR045224 GO:0003700
Acco02g2039 278 Pfam Homeobox associated leucine zipper 129 168 IPR003106 GO:0006355|GO:0043565
Acco02g2039 278 Pfam Homeodomain 74 127 IPR001356 GO:0003677
Acco02g2039 278 SUPERFAMILY Homeodomain-like 65 131 IPR009057 -
Acco02g2039 278 ProSitePatterns 'Homeobox' domain signature. 104 127 IPR017970 GO:0000981|GO:0006355
Acco02g2039 278 ProSiteProfiles 'Homeobox' domain profile. 69 129 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2039 Acco-ChrAcco02 16789006 16790599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2039 1 269 Homeobox Transcription Factor Family AT3G01220 51.220 2.55e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco02g2039 Homeodomain 1.5e-15 CL0123