Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g2038 ATGCACCTTGATCCTGTTGACCAATTTGAAATTTACAAAACAGTTTTATCTGTAAATGTAAACATGCGTTATAATTTTGCAGTGGGATGTATGTATACACGAGGCGAATGCGTGTTGGGTTGTGAAGAAATGGCTGGTGCTTTGAACCTAGAAAAGTCAAAGGCAAAGAAGAAAACTGACGTCGAAGCTCGAAGTCCGAAATGGTGGATGAAGTTGAGTGCTATCGTCGGAGGCTGCTTAGTTTTGAAGTCCAAAGCCAAAGAGGACGCTGGCTATGTAGAAAGTGACCACCGTAACAAGAAATCCGAATCAGGAGCTGGATCATCATCCTTGTCGCACTTTGAGGAAATAAAATTTTCTGACAATCTGAGAAGGTTTGCTTTTGAGGAGCTCAAGGAAATCACATATAATTTTAGACCTAGCAGTATTCTTGGCCAGGGAGGCTTTGGCTGTGTTTTTAAAGGTCGAATAAAACAAGCAAAACCAACTGGTGGCTCGGCGAATAATGCAGTTGCAGTAAAGATTCTTAACATTGGAGGATTTCAAGGCCACAGAGAATGGCTTACTGAGGTCAATTATCTTGGAGAACTCAGGCATCCGAATCTAGTTAAATTAATAGGCTACTGTATTGAGCAAGAAAAAAGGTTACTGGTGTACGAGTTTATGTCTCGAGGAAGCTTGGACAACCAACTGTTTAGGAGGTCTACGCCACTTCCATGGCCGATCAGACTGAAAATTGTGGTTGGTTCTGCAAAAGGCCTTGCATTTCTGCATGAAGAAGCTAACAGAACAGTGATATTTAGGGACTTCAAAACATCCAATATCCTGCTGGATGCGGACTTCAATGCAAAACTTTCTGATTTCGGACTTGCCAAAGATGGACCGGAGGGGGACTCAACTCATGTATCTACTCGAGTGATGGGAACTTTAGGATATGCAGCTCCTGAATATGTCATGACAGGACACCTTACGGTGAAGAGTGACGTGTACAGTTTCGGGGTAGTTTTGCTAGAATTGCTGACAGGACGAAAGGCCATGGACAAGAATAGGCCAAGAGGGGAGCATAGCTTGGTAGAGTGGGTAAGGTCCAGCTTTGCAGGCAGAAAAAAGTTCACCAAACTAATGGACCCTCGCCTCCAAGGTATTTACTCCCACAAAGGAGCTCAGACAGCCTTTCACGTGGCTGCTCGCTGCCTTGCCCGTCCCCCGAGAGCAAGACCAACCATGTCTGAGGTTGTCGCACTCTTAGAGCCATTGCTTGATCTCGACGACATTCCTCTCTTGCCTTCAGCGCCTTTCCACCCGTCGTCCGCCGTTGCCGGCGCTCAATTTCGTGGGCCGTCATTCCAGCCTGGCTCCTCCTCCAGGAGCTTACCCAACTCGCCTTTTCGTCCATACTATCCTCTTCCCAATCCCAGTCCTAAGGCAAGCATTCCATGA 1440 0.4625 MHLDPVDQFEIYKTVLSVNVNMRYNFAVGCMYTRGECVLGCEEMAGALNLEKSKAKKKTDVEARSPKWWMKLSAIVGGCLVLKSKAKEDAGYVESDHRNKKSESGAGSSSLSHFEEIKFSDNLRRFAFEELKEITYNFRPSSILGQGGFGCVFKGRIKQAKPTGGSANNAVAVKILNIGGFQGHREWLTEVNYLGELRHPNLVKLIGYCIEQEKRLLVYEFMSRGSLDNQLFRRSTPLPWPIRLKIVVGSAKGLAFLHEEANRTVIFRDFKTSNILLDADFNAKLSDFGLAKDGPEGDSTHVSTRVMGTLGYAAPEYVMTGHLTVKSDVYSFGVVLLELLTGRKAMDKNRPRGEHSLVEWVRSSFAGRKKFTKLMDPRLQGIYSHKGAQTAFHVAARCLARPPRARPTMSEVVALLEPLLDLDDIPLLPSAPFHPSSAVAGAQFRGPSFQPGSSSRSLPNSPFRPYYPLPNPSPKASIP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g2038 479 MobiDBLite consensus disorder prediction 463 479 - -
Acco02g2038 479 FunFam Serine/threonine-protein kinase PBS1 222 425 - -
Acco02g2038 479 Gene3D Phosphorylase Kinase; domain 1 112 221 - -
Acco02g2038 479 CDD STKc_IRAK 144 414 - -
Acco02g2038 479 MobiDBLite consensus disorder prediction 447 461 - -
Acco02g2038 479 PANTHER OS01G0588500 PROTEIN-RELATED 97 419 - -
Acco02g2038 479 Pfam Protein tyrosine and serine/threonine kinase 142 415 IPR001245 GO:0004672|GO:0006468
Acco02g2038 479 FunFam Serine/threonine-protein kinase BIK1 106 221 - -
Acco02g2038 479 SUPERFAMILY Protein kinase-like (PK-like) 123 440 IPR011009 -
Acco02g2038 479 ProSiteProfiles Protein kinase domain profile. 138 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g2038 479 Gene3D Transferase(Phosphotransferase) domain 1 222 424 - -
Acco02g2038 479 MobiDBLite consensus disorder prediction 442 479 - -
Acco02g2038 479 ProSitePatterns Protein kinases ATP-binding region signature. 144 174 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g2038 Acco-ChrAcco02 16775568 16780314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g2038 115 416 Glycoside Hydrolase AT3G07070 50.814 2.65e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco02g2038 PK_Tyr_Ser-Thr 1.2e-45 CL0016