Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1984 ATGACGGGAAGGAGGAAACCTCTGGTACTCGCCTCCACCAAGCAGCTCATCAATTCTGTGCTCAGCTCATCACAAAGTGGGGAAGCAACCCCTGGAGCTGGAGACAAGCTCTTCGATGACGGCACTCCCAGGAATCTGCAGTTGTCTGTCGGCATTCTTCGACTTTCCGAGGATGCAAACGAAATACCGAAACCTCAATCGGCTGCTCTTGATGATTCTGCGTTGGTCGGCCTATCAACTTCGCTTTTGAGAAGGCTTTCTATAACTTCGGGTTCACTATTGGTTGTTAAGAACGTTGAGATGAACATACAGAGAGTAGCTCAGGCAGTTGCCCTGGATCCTCCTGGCAGTGATGAGTGCAAATCTGATGTTAAATTGCCCTCTTCCCCTATAATGCTTGTGTTTCCTTCTTGTGCTTTCCCTAATGGGGGCGCGTTAGATCATGAAGTTGCTTATATATCTCCTCTCTTGGCTTTCAACCTTTATTTGCACACAACATGCTTAGAATCCATTCTACACCAAGGGGAAGAGGTGTTAGCCTCTTATTTTGATCCAAAAGTGAACGACAAGGCTACTGCTAAAAGATATGAGACTTCTGTCATTGATATTGAGTTGGAACCTTTGGTTCAAGCTCCTAGGTATGCTTCACATCTAAGGGTTTCTTTTGTGAAGATACCAGAATGTGGTACCCTTGAAACTCTCAGAGGAAGTTCACCTACAGAATCAGAAGACCGCCAAAATATGATTGATTCAGCATTACAAAAATATTTTGAAGTGACTAGATATTTGGCAAAAGGAGATATCTTTGGCATCAGAATAAATTGGAACTGCAATTCCATTCTATGTATTCCTTGCAACCAAAAAGCACAAAAGAAACTTGGAAATCTTATCTATTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAGTTCTTCTTGTCAACCGAGTTTCAACTGCTTTGGTTCTTGTAGGGAGCATCCCTTCTGCTCTTCCACCAGATTTGTTAATTGCTGGACCAGAAGAACCTGTGCCTTTACAATGGGACATAGTAAAAGTTTTGGCTTCAGTACTTACACCAGCTTTCTGTCCATCAGCACTTTCTTTAAAATTCAGAGTTTCAGTTCTATTGTATGGCTTAGCAGGTTGTGGGAAGCGGACTGTTATTAGATATGTTGCTCGTCGGTTGGGCATGCATGTGGTGGAATATAATTGTCATGATTTAACATTGTCAGAGAAGAACACATCTGTAGCACTAGTTCAAGCTTTCAAGACAGCTCGAAGATACTCACCAACTATACTTATTCTCCGTCATTTTGAAGTTTTCCGAGACATGCAAGCTCTTGAGGGTCCAGCAAATGATCAAAGAGGCAATACATCTGAAATTGCATCAATTATTAGGAAATTCACAGAGCCAGTGAATAAAGATGGTGGTATATACTCCCATGAGAAACCAAATGGTGAATTTGGTGAGAAGAGTGCTGACAATACAAGTGGGCATCCAATCTTGTTGATTGCAACTGCCGTTAGTTCAGAAGGTCTGCCTTCAACTATCAGACGATGCTTCAGCCATGAAATAAAAATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATCCCGGTCATTGCAAAGTGTCATCTCTAATACTGATGCTGAGAGTTTTGCAAAAGAAATGGTTGGGCAGACATCTGGTTTCACACCCAGAGACATGCGTGCTTTGATTGCGGATGTTGGTGCAAACTTATTTTCTAAGAGTTTTGATGCTGCAGATAAAGCTAGGCCTAAAGATATTGATGGTTCTTGTAGTTCTGAAGTGATGCAGGACAACAACCACTTGAAAGTTCCACAAGAGGTTCAAGACGTCAAAGAACACTTGACAAAAGCTTTGGAACAATCAAAGAAAAGAAATGCCACTGCATTGGGTGCTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTGAAAAAATCAATACTAGATACTGTTCAGTTGCCTCTCCTGCATAAGGATCTGTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTCTGTATGGTCCTCCAGGAACTGGCAAAACATTATTAGCCAAAGCTGTTGCCACCGAATGTTCCTTGAATTTTCTTAGTGTGAAAGGTCCTGAACTAATCAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCCAGATCATCACGACCGTGTGTTATCTTCTTTGATGAGCTCGATTCTCTTGCTCCAGCCCGTGGTGCTTCTGGGGATTCTGGGGGTGTTATGGATAGAGTGGTTTCTCAGATGCTGGCTGAGATTGATGGCCTCAATGATTCTGCACAGGATCTCTTTATCATAGGTGCAAGTAACAGGCCAGACTTGATAGACCCTGCACTTTTACGCCCGGGCAGATTTGATAAACTGCTATATGTTGGAGTTAACTCTGATGCATCTTACAGAGAGAGAGTCCTTAAAGCACTTACCAGAAAGTTTAAATTGTCTGAAGACGTGTCACTTTACTCAATAGCTAAAAAGTGTCCGCCAAACTTTACTGGTGCAGACATGTATGCCTTGTGTGCAGATGCATGGTTTCAGGCTGCAAAACGCAAGGTTTTAAGTGCAGATCCAGAGTCTTCCGGTAAGGATGATGACACAGACTCTGTTATTGTTGAGTACAGTGATTTTGTCCAGGTCTTGGTGGAGCTGACGCCTTCTCTGTCCATGGCTGAACTTAAAAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCAAATCAAAATAA 2808 0.427 MTGRRKPLVLASTKQLINSVLSSSQSGEATPGAGDKLFDDGTPRNLQLSVGILRLSEDANEIPKPQSAALDDSALVGLSTSLLRRLSITSGSLLVVKNVEMNIQRVAQAVALDPPGSDECKSDVKLPSSPIMLVFPSCAFPNGGALDHEVAYISPLLAFNLYLHTTCLESILHQGEEVLASYFDPKVNDKATAKRYETSVIDIELEPLVQAPRYASHLRVSFVKIPECGTLETLRGSSPTESEDRQNMIDSALQKYFEVTRYLAKGDIFGIRINWNCNSILCIPCNQKAQKKLGNLIYFKVIAMEPSDEPVLLVNRVSTALVLVGSIPSALPPDLLIAGPEEPVPLQWDIVKVLASVLTPAFCPSALSLKFRVSVLLYGLAGCGKRTVIRYVARRLGMHVVEYNCHDLTLSEKNTSVALVQAFKTARRYSPTILILRHFEVFRDMQALEGPANDQRGNTSEIASIIRKFTEPVNKDGGIYSHEKPNGEFGEKSADNTSGHPILLIATAVSSEGLPSTIRRCFSHEIKMGPLTEEQRAEMLSRSLQSVISNTDAESFAKEMVGQTSGFTPRDMRALIADVGANLFSKSFDAADKARPKDIDGSCSSEVMQDNNHLKVPQEVQDVKEHLTKALEQSKKRNATALGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSAQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLSEDVSLYSIAKKCPPNFTGADMYALCADAWFQAAKRKVLSADPESSGKDDDTDSVIVEYSDFVQVLVELTPSLSMAELKKYEQLRDQFEGKSK 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1984 935 SMART AAA_5 685 825 IPR003593 GO:0016887
Acco02g1984 935 SMART AAA_5 371 532 IPR003593 GO:0016887
Acco02g1984 935 ProSitePatterns AAA-protein family signature. 792 810 IPR003960 GO:0005524|GO:0016887
Acco02g1984 935 Gene3D - 647 924 IPR027417 -
Acco02g1984 935 Pfam ATPase family associated with various cellular activities (AAA) 689 821 IPR003959 GO:0005524|GO:0016887
Acco02g1984 935 Pfam ATPase family associated with various cellular activities (AAA) 375 528 IPR003959 GO:0005524|GO:0016887
Acco02g1984 935 Gene3D - 823 909 - -
Acco02g1984 935 CDD RecA-like_PEX6_r2 661 820 IPR047533 -
Acco02g1984 935 FunFam Peroxisomal biogenesis factor 6 647 836 - -
Acco02g1984 935 Gene3D - 349 551 IPR027417 -
Acco02g1984 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 586 IPR027417 -
Acco02g1984 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 648 929 IPR027417 -
Acco02g1984 935 FunFam Peroxisome biogenesis protein 6 823 909 - -
Acco02g1984 935 PANTHER AAA-FAMILY ATPASE 68 932 - -
Acco02g1984 935 FunFam Peroxisome biogenesis protein 6 344 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1984 Acco-ChrAcco02 15923170 15934040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1984 605 880 Calmodulin-binding Proteins AT3G56690 35.714 1.95e-39 156