Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1954 ATGAGCGCATATGAAGAAGTAGTACTTGACAGTGAGAATGAAGAAATGCAAGGCAGTAAAGTTGTGACTGTTTCCAAAGGGTTATTGGATAAAAAAGTTTATCGAACCGTCAAAAATCCTGGAATAAAGTTCCAGAAGAGGCATCTTGGGCCACCTTCACCTAGTAAGCAAGTGGAGAAGGGAGCAGCAAACACAAGTGTCCCTTCTTATGGGAAATCTGCTACTGGGCACAAAGAAAAATCAACTGACGCTGAGAACTCTGATAACAAAAATCATCTACATTCTGCTACAAAGTTGAGTCAGATACCCTCTCCAGAGATTGGGGAATTAACCCAAGACGATGCAGTGGGATATGTGGATCACTACTTGACAGTCAACAAAGTAGAATTATCTCCAGGAATTTGCCATAGAAAGGCGAGCAGAGAGAAATCACCACCTCTGATGAGTGCAAGAGGGGCACAAAATTTGGCCAAGAAAATTCAAGATCGGATCCGTCATGAAGAAAAAAGACCCTTCGAATTGATTGACGCAGGTCAAAAGGACACGGGAGCTGGGATTTTTCAAAAAAGGATTGCGGTATCTTCTAATTTTGGGGTCTGTGGACAGACATACACAAGACGTAAACAGAAAAGTGGTTATCATGATAACCGAGAAACCTGTAGCACAGGTAATGGATGCGAAGAGAAGTTAGCTCAAGGACTAGGAACAGTTGCTGAGAATAACAATATCAAGGGGCTGGATGTTCAGTCAGATGCTACAGGAAAGAATGTTGACATTTATTCTGGTGTGGAACATACGGAGAACAACTCTGATATTGGTTTAGACACCCAGGTAGCTGTTGAAGCTATGGAGGCCTTAGCTTATTCGCCCCCTCCTGATGGCAGATGCACTAGGATCAAAGATCAATCAAGCAAACAAAGAAAGAGGAATAATAATTTTGTAGATGGAGGTATTGTGAGATCTAAAAGGAAAAGGACTGGTTTAACAGCCGATCCATTCAAGCTGGTTCGTGAGACAGAATATCTTAAGAAGCCTTCGAGTTTATTTGGGATGGCTATGAAGAACAGTTTGAATTATCAGGTACAAGTTTGTCCACGGCTGTCCACTAGCAGCAGTTTTTCAAGTCTTAAATCATGGCATTATCCAAAAGGACCAAGAGGGAAAAGAAAATGTCCTGACGCAAAAAGCTATCCAGATGCACCTAGAAATTGGGGTACTCAGTCTATCATTGTCAAAGGAAATGAAAGTAGTATCATTTCTATCGCAAATCACATTCAGAGGGATGCAGAAGGCCAAGATACTGAGAACGAAGCATGTTTTCCTAACATCCATCCACTTTATAATGCTAAATGTATCGGCACTGGCACCATCAGTGCAGGCAGAGAGGTTTCAAATGCCAATTCTACTTGCTATAAGAATAAAAAAAAACCAAGTAAAAAAAACCTGCCAAAATCCTACCGTTTAAAGGAGCTTATTAGATTAGGCGTTTCTGAGTACGCGCCAGATCTGATAGGGAAAAATCTGAGACAACGAAAAGATATGTCTCATGTTCGAGTTCTGTTAAGCCGGCATTTGGATGAGAGTATCATAAAGCAGCAAAAGAAGATCTTGGCACGGATGAACATATCTCTTGCATCAAGCCCCATGGAGGCTACACATTTTGTGGCAGACAAATTCACACGTACAAAGAATATGTTGGAAACCATGGCTCTTGGTAAATTGGTGGTGACGCATTTATGGCTTGAGAATTGTGGACAGGCCAACTGTTTAGTTGACGAGAAAAATGATATTCTAAGAGATGTGAAAAAGGAAAAGGAGATGGGCTTTACCATGCCTGCTTCTCTTGCTCGAGCAAAACAGCAACCACTTCTACAGGGTAAAAGTGTCTTCATAACCCCTCACATTAAACCTGATAACATAGTGATCACAAGCTTAGTCACCGCTGCTCATGGTCAGTTGGTGGATGAAAGCCAGATTCATTCATGCAAGAATTATGAGATGTTAAATAATATGTTGATCATTTCTTGCGAAGAAGACCGTGAAGTATGCCGCCCGTTCTTTCAGAGAGGAATTGCTGTTTACGGTTCGGAGCTTCTTCTGAGTGGAATAGTGACCCAGAAACTGGAATTTGAGAGACATCAACTCTTCGCAAATCATGCTGCAAGGAAATGCTTCGATACATCAAACCGTCGTTTTGGGAAGGTCTACAGAAGGCGGCGCAACCTGTATGTGGATCACATTCACAGCTGA 2250 0.4182 MSAYEEVVLDSENEEMQGSKVVTVSKGLLDKKVYRTVKNPGIKFQKRHLGPPSPSKQVEKGAANTSVPSYGKSATGHKEKSTDAENSDNKNHLHSATKLSQIPSPEIGELTQDDAVGYVDHYLTVNKVELSPGICHRKASREKSPPLMSARGAQNLAKKIQDRIRHEEKRPFELIDAGQKDTGAGIFQKRIAVSSNFGVCGQTYTRRKQKSGYHDNRETCSTGNGCEEKLAQGLGTVAENNNIKGLDVQSDATGKNVDIYSGVEHTENNSDIGLDTQVAVEAMEALAYSPPPDGRCTRIKDQSSKQRKRNNNFVDGGIVRSKRKRTGLTADPFKLVRETEYLKKPSSLFGMAMKNSLNYQVQVCPRLSTSSSFSSLKSWHYPKGPRGKRKCPDAKSYPDAPRNWGTQSIIVKGNESSIISIANHIQRDAEGQDTENEACFPNIHPLYNAKCIGTGTISAGREVSNANSTCYKNKKKPSKKNLPKSYRLKELIRLGVSEYAPDLIGKNLRQRKDMSHVRVLLSRHLDESIIKQQKKILARMNISLASSPMEATHFVADKFTRTKNMLETMALGKLVVTHLWLENCGQANCLVDEKNDILRDVKKEKEMGFTMPASLARAKQQPLLQGKSVFITPHIKPDNIVITSLVTAAHGQLVDESQIHSCKNYEMLNNMLIISCEEDREVCRPFFQRGIAVYGSELLLSGIVTQKLEFERHQLFANHAARKCFDTSNRRFGKVYRRRRNLYVDHIHS 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1954 749 MobiDBLite consensus disorder prediction 40 106 - -
Acco02g1954 749 MobiDBLite consensus disorder prediction 299 319 - -
Acco02g1954 749 Gene3D BRCT domain 622 722 IPR036420 -
Acco02g1954 749 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 458 716 - -
Acco02g1954 749 SUPERFAMILY BRCT domain 510 614 IPR036420 -
Acco02g1954 749 CDD BRCT_PAXIP1_rpt6_like 623 709 - -
Acco02g1954 749 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 510 594 IPR001357 -
Acco02g1954 749 MobiDBLite consensus disorder prediction 76 92 - -
Acco02g1954 749 Coils Coil 150 170 - -
Acco02g1954 749 MobiDBLite consensus disorder prediction 58 72 - -
Acco02g1954 749 Gene3D BRCT domain 505 621 IPR036420 -
Acco02g1954 749 CDD BRCT_MDC1_rpt1 528 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1954 Acco-ChrAcco02 15652169 15655298 Wgd