Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g1946 | ATGAGGCCTGCACTATTGTTGCTAGGTTGTGTGTTGCTTTTTGCTTCTCTTGACGTTGGTCAGGGGGACGAACTGTGTAATAACTTCTATCAAAGAACTTATTGTCCTCAAGTAGAGGACATCATCAAAACAAGAATCTCACAGCTTGTCTCTTCTAATCCTGCTTTGCCTTCCCAGTTACTCAGATTGCACTTTAACGACTGCTTTGTTAGGGGTTGTGATGCATCAGTGCTGCTGAAGTCCACTGCTAATAATATTGCAGAAAGGGACTCGGTCCCAGACCTGACTTTGGAAGGCTTTGAGGCCATCAATGACATAAAAGCCACTGTGGAGGCTCAATGCCCAGGTGTTGTTTCCTGCGCTGACATCCTCGCATTGGCCGCTAGGGACGCCGTTTCCATCGCTTTCAAGAAACCTTTATGGGAGGTGCTTACTGGTAGAAGAGATGGGAGAGTATCGAGAAGCGGAGAAGTAATTGGGAATATTCCGGCACCGTTCTTCAACTTCACTCAACTCAGAACCAACTTCGCCAGCAAAGGCCTGACGGTGCACGACCTGGTGGTGTTGTCAGGCGCTCACACCATCGGAGTAGCACACTGCAACTCCTTTATCAGCAGGCTCTTCAACTTCACCGGAAAAGGCGACCAGGACCCTTCTCTGGACCCCACCTACGCCGCCTTCCTCAAGTCCAAATGCAAAGGCCTCAGAGACAACATCACTTTCGTGCCGATGGATACCAATAGCTTCACCTCTTTTGACTCTCACTATTACTCCAACCTTGTCCAGAAAAAGGGACTGTTGCAGTCTGATGTTGCTCTTTTGACCGACAAGCAGGCGGCGAAGAGTGTCAATGAACTGATTGACCAGAATAATTTCTTCACAGAGTTTGCGCAAGCCATGAAGAAGCTCGGAAACATTGAGGTCCTCACTGGCAACACTGGAGAAATCAGGAACAAATCTCCTGATGCTGAGCCTGGCAGGACTGAGGAAAACACGATTGAGGGCAGATTGACGAATGATCAGGGGAAGAGAGTGGAAAAAAGGGATAGAGAACGTAGGACTGGCGAGCTTTTTTCGATAATGCCAAAGTTGGTCAACGAGGAAGAGGATAGAGGAGAGAGAGGGCGGGAAGAGGGTTTGGACAACTCTGGATATTCCTTAATATTTCGGGCAGACAACAACAGTACAGTTCCCTTGGAGGCCCAAATTTTGGCACCGAATATTGAGTCAGGTCACGCAGGTGAGGTCGACATGGGCTTGGGCCCTTTAGACCCAAGGATTAAGAGTAGCGAGCTCATGGATGTGGGAGGAGTGATCCAGGATGAGGATTTGGACATGGACCCCCACCAGGATGTGGATTGGGATCTGGACTCTCCCGTCCAAGATTCTACTGACGAGATTCAAGATTCAGGAGAAGAATGCTCCTTGGTTCGGGAAACTGGACCTTAA | 1449 | 0.4893 | MRPALLLLGCVLLFASLDVGQGDELCNNFYQRTYCPQVEDIIKTRISQLVSSNPALPSQLLRLHFNDCFVRGCDASVLLKSTANNIAERDSVPDLTLEGFEAINDIKATVEAQCPGVVSCADILALAARDAVSIAFKKPLWEVLTGRRDGRVSRSGEVIGNIPAPFFNFTQLRTNFASKGLTVHDLVVLSGAHTIGVAHCNSFISRLFNFTGKGDQDPSLDPTYAAFLKSKCKGLRDNITFVPMDTNSFTSFDSHYYSNLVQKKGLLQSDVALLTDKQAAKSVNELIDQNNFFTEFAQAMKKLGNIEVLTGNTGEIRNKSPDAEPGRTEENTIEGRLTNDQGKRVEKRDRERRTGELFSIMPKLVNEEEDRGERGREEGLDNSGYSLIFRADNNSTVPLEAQILAPNIESGHAGEVDMGLGPLDPRIKSSELMDVGGVIQDEDLDMDPHQDVDWDLDSPVQDSTDEIQDSGEECSLVRETGP | 482 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g1946 | 482 | Gene3D | Peroxidase, domain 2 | 163 | 303 | - | - | |
| Acco02g1946 | 482 | CDD | secretory_peroxidase | 28 | 317 | IPR033905 | GO:0004601|GO:0042744 | |
| Acco02g1946 | 482 | Pfam | Peroxidase | 44 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 184 | 196 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 59 | 79 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 98 | 111 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 137 | 152 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 243 | 258 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 298 | 311 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 259 | 276 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 35 | 54 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Plant peroxidase signature | 117 | 127 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | FunFam | Peroxidase | 163 | 303 | - | - | |
| Acco02g1946 | 482 | PRINTS | Haem peroxidase superfamily signature | 118 | 135 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Haem peroxidase superfamily signature | 185 | 200 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Haem peroxidase superfamily signature | 57 | 71 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | PRINTS | Haem peroxidase superfamily signature | 245 | 260 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 324 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | FunFam | Peroxidase | 28 | 168 | - | - | |
| Acco02g1946 | 482 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 319 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Acco02g1946 | 482 | Gene3D | - | 28 | 319 | - | - | |
| Acco02g1946 | 482 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 185 | 195 | IPR019793 | - | |
| Acco02g1946 | 482 | MobiDBLite | consensus disorder prediction | 443 | 482 | - | - | |
| Acco02g1946 | 482 | PANTHER | PEROXIDASE 25-RELATED | 14 | 312 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g1946 | Acco-ChrAcco02 | 15570298 | 15573694 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g1946 | 24 | 319 | Peroxidase | AT1G05260 | 52.508 | 5.86e-104 | 311 |