Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1943 ATGTCATCGGAGATTACTGACGGAATTATTCCTTTAATTCTTTTACAGTTAGCTTACTCAGACAACGAACATGGCTCGGGGGAGAAATTTTCTTATGTGGCGTTGGTTTGTGTGAGCCAGAATATGTTAGAGAACGTGAAGAAGCTGAAAGAAGTGAACAAGAATCTTCGTAGGGAGATTGGGTATTCTCAGTTTGGTGATTTTCTCTTGTCTTTTAATATGTTCTATGATAGTGCGCATGATTTGTCATTGCCTACAATGTTCTTTCTTCTTGCATGGTCAAATCATTTTTTCCAATGCAAGATCTTGTCAAACCCTTTTGGGTTTCATGCTGAGGTTTTAGCGGTAATCCAATATCCCAAGTGTGATGTTTATAGCTTTGCGGTCACATTATGGGAGCTCTTGATGTTGCAGCAGCCGTGGGGAGGAATGAATCCGATGCAAGTTGTTGGCACCATGGGTTTCCTACATCGTCGTCTTGACATTCCCAACAACATAGACCCTGTCATTGCTGACATTATCTGGAAATGCTGGCAGACAGATCTAAAGTTGAGGCCCACATTTGCTGAGATCATAATGGCTTTGAAGGCATTACAGAAGCTGATAATCAGTTCTCACATGGCCATGTTTGGTGCAGAGTCGAAGTCAATCGTAGAAGAGGCTGCAAGACGAGAAGACAAGTGTAAAGCTAACTGGATATTTGTTCATCTATTGCCAGATAAAAGAGCAATCTGTGAAAAATTCGATTTGTTTGGTACAAAATTCTTTTTGGAAATCGCAATCAAATGGCTAAGTTTTGGTGTGCATAGATCAGATACATGCTCAACAGAAGCTGCTACTCCAAAGTTCAAAATTGACAGAAACTGTTTGGCGCTGTCAATAGAGAAGAACACAAACACTAGGTAA 906 0.4051 MSSEITDGIIPLILLQLAYSDNEHGSGEKFSYVALVCVSQNMLENVKKLKEVNKNLRREIGYSQFGDFLLSFNMFYDSAHDLSLPTMFFLLAWSNHFFQCKILSNPFGFHAEVLAVIQYPKCDVYSFAVTLWELLMLQQPWGGMNPMQVVGTMGFLHRRLDIPNNIDPVIADIIWKCWQTDLKLRPTFAEIIMALKALQKLIISSHMAMFGAESKSIVEEAARREDKCKANWIFVHLLPDKRAICEKFDLFGTKFFLEIAIKWLSFGVHRSDTCSTEAATPKFKIDRNCLALSIEKNTNTR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1943 301 Coils Coil 39 59 - -
Acco02g1943 301 Gene3D Transferase(Phosphotransferase) domain 1 106 233 - -
Acco02g1943 301 SUPERFAMILY Protein kinase-like (PK-like) 120 206 IPR011009 -
Acco02g1943 301 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 205 - -
Acco02g1943 301 Pfam Protein tyrosine and serine/threonine kinase 121 194 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1943 Acco-ChrAcco02 15532544 15535766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1943 121 225 MAP Kinase Kinase Kinase AT1G73660 60.000 3.33e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco02g1943 PK_Tyr_Ser-Thr 3.1e-13 CL0016