Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1924 ATGACCTTCTTCTCCGCTCTTCATCATCTCAACTCAAGTCAAACTCAAAGCAATCATCTTCTTCTCTCTCGCTCTCACCCTTTCACCCCCAGTTCTAAGCTTCTTTCTCTTCCCTCTCATCACTCTGTCCACCCCCAACCCTCATCCTCCATGTCCCTCCTCCTCTTCTTCTTGTTCTTCTTTGTTTCCCTCTCTTTCCCACTTTCTTCCCTCTCTGCAAACGACACCGGTCTCAATGCTCCCTGCCCTCTCAACTTCACTGTCCTCAATGTTGTCGCCGGCGGCGACCAACCCTCTCTCGACTCCAGCACTATCTGCGAGTTCTCTCGCTCCTCCATCCGTCTCGTTCTCGCCGATTACCTCCGCCGCACTGGCATCTTCCTTCCGCCTCTCAACTCTTCCGAAACCTGCTGGGATAATTTCCAGAAATTCATCAATCAATACCGCCCCAACCTCGACGTTCGCGCCACTTGTGGCTTCCAAACAACCTGGATCTCCCAGGGATGCCAGAACATCACCACCAAAGATGATTTCGTCTCCCTGATTCCGCCCTCGACGATCCAGGACGCCGTCCGGAATTGCAATCAGTCGCTCGAAAATAACTCCCCCTGCGCCCTCTGTACCTCCACGAGCTTGGCGGCTATGCAATCCTTCGTGAAAGGAAATTCGACCGGAAACGTCTCCGATTGTACGGCCTATCCCCCAATTTACGCCGCCGCCTTTGCCAATCAAGCTGGACCCGCCGACAGAGGCGTTGCCAAGTGCATGTTCCTTCTGAGCTTCAATTCGCCAGGTTCCCCCGGTAATAAACGAACGATTGTTATTGTAGTGGCTGTGATTGTTTGTTTATTGGCTTTGTCGCTGGTGATTGTTGGGCTCTGGCTTCACCGGAGATCGAAGAAGAAGGGCAAGAGGGGTATTATTAAAACTGAAATGGGTGTTGTCGTGTCTGGGTTGGATTCTATGAAGGAGAGCACCACTTTGATCAGGTTTACATTTGATGAGATCAAGAAGGCAACCAGAAACTTCTCTAGGGATAACATAATAGGTAGAGGGGGATATGGAAATGTGTACAAAGGGTTACTCCCAGATGGAACTGAAGTTGCATTGAAAAGGTTCAAGAACTGTTCTGCTTCAGGAGATGCAAGTTTCACTCATGAAGTTGAGGTCATTGCCAGTGTCAGGCATGTGAATTTACTTGCTCTGAGAGGTTTTTGTACAGCCACAACTAATTTGGAGGGTCACCAGAGGATTATCGTTTGTGATTTGGTGAAGAATGGGAGTCTTCACGATCATTTATTTGATTCTTCTGGAAAGAAACTCAGCTGGCCAGTCCGTCAACAGATTGCACTGGGAACTGCTAGAGGATTGGCTTATTTGCACTATGGAGCTCAACCTTCCATTATCCATAGGGATATTAAAGCAAGTAATATACTTCTGGATGAGAAGTTTGAAGTCAAAGTTGCAGATTTTGGACTTGCTAAGTTCAATCCAGAGGGAATGACTCATATGAGCACACGAGTAGCCGGAACAATGGGGTATGTTGCGCCAGAGTATGCATTGTATGGGCAATTAACAGAGAGAAGTGATGTGTTCAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAAGAAGGCTCTTCAAATGAACGAGGATGGCCAGCCTTCATCTTTGAGTGACTTGGCCTGGTCATTGGTTAGGGCAGGTAGAGCTTTGGATGTGATTGAAGATGGTATGCCTGAACCGGGTTCACCAGAAGTGCTTGAGAAGTATGTGTTAATAGCTGTTCTTTGTTCGCACCCTCAGTTATATGCAAGGCCAACAATGGATCAGGTGGTGAAGATGTTGGAGACTGAGCAATCAGTACCATCAATACCTGAACGGCCAATTCCTCTAGTTGCTAGAAGGCTTGATATTGTGAGATCCGCCGGTAGCTTTGGCGGCTCCGGCCAGCTCTCTAGTCCAACAGGTTATCGATCATTTGTAGATGAAAGTGAGTGCCATTCTTCTAATTCAAAGGAAGAAGAAGGAAGTTCGGACTCAAGAATACTGCGTACATAA 2064 0.4772 MTFFSALHHLNSSQTQSNHLLLSRSHPFTPSSKLLSLPSHHSVHPQPSSSMSLLLFFLFFFVSLSFPLSSLSANDTGLNAPCPLNFTVLNVVAGGDQPSLDSSTICEFSRSSIRLVLADYLRRTGIFLPPLNSSETCWDNFQKFINQYRPNLDVRATCGFQTTWISQGCQNITTKDDFVSLIPPSTIQDAVRNCNQSLENNSPCALCTSTSLAAMQSFVKGNSTGNVSDCTAYPPIYAAAFANQAGPADRGVAKCMFLLSFNSPGSPGNKRTIVIVVAVIVCLLALSLVIVGLWLHRRSKKKGKRGIIKTEMGVVVSGLDSMKESTTLIRFTFDEIKKATRNFSRDNIIGRGGYGNVYKGLLPDGTEVALKRFKNCSASGDASFTHEVEVIASVRHVNLLALRGFCTATTNLEGHQRIIVCDLVKNGSLHDHLFDSSGKKLSWPVRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEVKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQMNEDGQPSSLSDLAWSLVRAGRALDVIEDGMPEPGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVARRLDIVRSAGSFGGSGQLSSPTGYRSFVDESECHSSNSKEEEGSSDSRILRT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1924 687 SUPERFAMILY Protein kinase-like (PK-like) 321 618 IPR011009 -
Acco02g1924 687 MobiDBLite consensus disorder prediction 648 687 - -
Acco02g1924 687 Gene3D Phosphorylase Kinase; domain 1 312 422 - -
Acco02g1924 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Acco02g1924 687 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 305 422 - -
Acco02g1924 687 Pfam SPARK 79 223 IPR043891 -
Acco02g1924 687 ProSiteProfiles Protein kinase domain profile. 343 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1924 687 SMART serkin_6 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1924 687 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Acco02g1924 687 CDD STKc_IRAK 349 618 - -
Acco02g1924 687 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 424 625 - -
Acco02g1924 687 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 197 682 - -
Acco02g1924 687 MobiDBLite consensus disorder prediction 667 687 - -
Acco02g1924 687 Pfam Protein kinase domain 344 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1924 687 Gene3D Transferase(Phosphotransferase) domain 1 424 626 - -
Acco02g1924 687 MobiDBLite consensus disorder prediction 648 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1924 Acco-ChrAcco02 15377432 15379495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1924 55 662 Receptor kinase-like Gene Family AT2G48010 63.934 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Acco02g1924 Pkinase 1.7e-42 CL0016