Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1913 ATGGAGAAGACGGAAAGAGAAGAGGGAGAACTGGAATGGATAAGGGTAGGTCCTCCATCTTCACAGCAAGAACAAGTAGTAAATGACGTACGCGACCAGAAAATCAAAGTACTTGAACGTCTTGATAAGTCAAGAAAGCGTCTTCGAGCCATTGTTTATGAAGGATTTGACGAACAAGTTGACGTTCTTGGCTTGAGTGGAGCCAACCTCGTCAAAGCCATTGGAGATGGGCTCAATGGCAATGTTGGAGGTGATGATGGAGTTGACAATATATTTGGTGGTGGTGATGTTAGCAGAGTTGCAATTGGTCTCCCTTTCTACTCACTTGCGTTTCAGCGAATCGTTTTGAACGGGATGGACACTCAAGCAGACCTTCCTCAAACGCCAGCCAAAAGGCACAAGTGTGCAGCATGCTATAGGCAATATAAGAAAAGGGAACATCTCATTGAGCACATGAAAATCTCATACCACTCAGTCCATCAGCCTAAATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTGAGGGAACACCTTGCTGGTCCATTGCCGAAAGGAAATTGTTCTGAGCACTTTTCTGAATATGGTTGTTCACTTTGCTTAAAATTATTTGATAGCTCCACAGCTCTTATCGAGCATAAAGAGATATGTTATCTATCTGCACCCACTCCTCTGGGAACAGAGCCGATGACCTCTATAAGACCCCCAATGCATCGTCCAGATTCTTCTGATGAAAACGACACTGGAAGGCACCCTGGAGCAATTGCAATTGATTGTGAAATGGTTGGAGGTGGAAGTGATGGAACAATAGATCTTTGTGCTAGAGTGTGCATGGTTGATGAAGATGAGAATTTAATTTTCCATACCTATGTGCAGCCTCAAATCCCAGTTACTAACTATAGATATGATATTACAGGGTTGACAGAAGAGCATCTCAGAGATGCCATGCCACTCAAGGAAGTCCAAGAAAAGGTATTGGAAATTTTGTACAATGGAGAATCAATTGGAAAAGTTAGATTGGATGGAGGAAAGGCCAAGCTTCTTGTGGGGCATGATCTAGAACATGATTTGGACTGTCTCAATTTGACTTATCCTGATCATATGTTGAGGGACACTGCAAAGTATCGTCCATTGATGAAAACAAACTTGGTCAGCCATTCGCTTAAGTACCTTACTCGAACATATTTAGGTTATGACATCCAGAAAGACACACATGACCCTTTTGAAGACTGTGTTTCCGTGATGAGGTTGTACAAGAGAATTCAAGGCCAAGTTCATACGGAGGAAAACTTCAGAGCATTTACTCCAAGTAGCGTCACCGGCAATTCTGATTCTTGGAATTCCAAGGAACTTGAGAACTCTACACCAGATGAACTCTTTGCCTTGTCAAAGTCAGACTATAAGTGCTGGTGTTCAGATTCCATGTAG 1434 0.4268 MEKTEREEGELEWIRVGPPSSQQEQVVNDVRDQKIKVLERLDKSRKRLRAIVYEGFDEQVDVLGLSGANLVKAIGDGLNGNVGGDDGVDNIFGGGDVSRVAIGLPFYSLAFQRIVLNGMDTQADLPQTPAKRHKCAACYRQYKKREHLIEHMKISYHSVHQPKCGVCQKHCKSFESLREHLAGPLPKGNCSEHFSEYGCSLCLKLFDSSTALIEHKEICYLSAPTPLGTEPMTSIRPPMHRPDSSDENDTGRHPGAIAIDCEMVGGGSDGTIDLCARVCMVDEDENLIFHTYVQPQIPVTNYRYDITGLTEEHLRDAMPLKEVQEKVLEILYNGESIGKVRLDGGKAKLLVGHDLEHDLDCLNLTYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQKDTHDPFEDCVSVMRLYKRIQGQVHTEENFRAFTPSSVTGNSDSWNSKELENSTPDELFALSKSDYKCWCSDSM 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1913 477 MobiDBLite consensus disorder prediction 1 26 - -
Acco02g1913 477 ProSitePatterns Zinc finger C2H2 type domain signature. 135 157 IPR013087 -
Acco02g1913 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 133 162 IPR013087 -
Acco02g1913 477 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 136 429 IPR047021 GO:0004527
Acco02g1913 477 SUPERFAMILY Ribonuclease H-like 257 423 IPR012337 -
Acco02g1913 477 MobiDBLite consensus disorder prediction 232 252 - -
Acco02g1913 477 Pfam Exonuclease 257 420 IPR013520 -
Acco02g1913 477 Gene3D - 253 436 IPR036397 GO:0003676
Acco02g1913 477 SMART exoiiiendus 255 429 IPR013520 -
Acco02g1913 477 Gene3D Classic Zinc Finger 117 183 - -
Acco02g1913 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 197 226 IPR013087 -
Acco02g1913 477 CDD REX4_like 257 421 IPR037431 GO:0006364|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1913 Acco-ChrAcco02 15295385 15302265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1913 119 477 C2H2 Transcription Factor Family AT3G27970 52.089 3.37e-137 397