Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1901 ATGACCATATCTATGATAATCAGCAGACTAACACAACCCCTAATAAATATTTCTTCTGTTAGCCCAAAAATAAATGTTACGACTCTTCCGCGGCAGAAGGAGAATGTTGTTTTGGTGATGGGGGCCACCGGCGCCGGGAAGTCCAGGCTCTCCATCGACCTCGCCACCCGTTTTCCTGCAGAGATCATCAACTCTGATAAAATGCAAGTGTACGAAGGCCTCGACATAGTGACAAACAAGATCACCGAGGAAGAACAGCGAGGTGTTCCTCACCATTTACTAGGAACACAGAATCCAAACTCAGAATTCACGGCGAGCAATTTCTGTGATATGGCTTCACTTGCCATTGAGACAATTAGGAGTCGTGGAAAGCTTCCGATCATCGTCGGAGGCTCGAATACTTTCCTGGAGGCTTTAATCGATGACGACGACTATAAATTTCGATCGAGGTACGATTTCTGTTGCCTCTGGGTAGACGTGCACATGCCCGTTCTTCATTCGTACGTTGCAGAACGGGTGGATCAGATGTTCAAGAAAGGAATGGTGAACGAATTGAGGCCTTTCTTCAATCCAAAAGGGGACTACTCACTAGGGATCAGGAAGGCCATCGGAGTTCCAGAATTCGACAGATATTTCCGAAGGGAAGCACAGGCGGATGAGGAAACGAGGCAGATGCTGTTGGAAGAGGCGTTGAGGGAGATGAAGGAGAACACGCGGAAATTGGCGGGAAAACAGCTGGGCAAGATCCAGATCCTTAAGGACGTGAAGAGATGGAAGATACAGCGCGTGGATGCGACGTCGGTGTTCCAGAAGCGCGGGGAAGAGGAGGAGGCGAATGAGGAGTGGAAGAAGACGGTGGCGGAGCCAAGTGCGATGATCGTCGCTCAGTTCCTTCGCAACTTGACAACGACGAAGAGCGGCGTGCCCGGCGGGCTAAGATTGGTGTCGCTGGAGAGCGCCATTGCTTCGTCTTCTCATCTTCAATCAGTGTGCCCTGTCTGA 1002 0.504 MTISMIISRLTQPLINISSVSPKINVTTLPRQKENVVLVMGATGAGKSRLSIDLATRFPAEIINSDKMQVYEGLDIVTNKITEEEQRGVPHHLLGTQNPNSEFTASNFCDMASLAIETIRSRGKLPIIVGGSNTFLEALIDDDDYKFRSRYDFCCLWVDVHMPVLHSYVAERVDQMFKKGMVNELRPFFNPKGDYSLGIRKAIGVPEFDRYFRREAQADEETRQMLLEEALREMKENTRKLAGKQLGKIQILKDVKRWKIQRVDATSVFQKRGEEEEANEEWKKTVAEPSAMIVAQFLRNLTTTKSGVPGGLRLVSLESAIASSSHLQSVCPV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1901 333 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 298 IPR039657 -
Acco02g1901 333 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Acco02g1901 333 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Acco02g1901 333 Pfam IPP transferase 69 142 - -
Acco02g1901 333 Pfam IPP transferase 148 246 - -
Acco02g1901 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 144 IPR027417 -
Acco02g1901 333 Gene3D - 33 298 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1901 Acco-ChrAcco02 15165314 15166315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1901 149 307 C2H2 Transcription Factor Family AT2G27760 30.645 3.43e-18 83.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1901 02 15165314 15166315 Acco06g0522 06 3241686 3242696 CCT
Acco02g1901 02 15165314 15166315 Acco02g1901 02 15165314 15166315 ECH