Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1900 ATGGAAGGACAAAGTAACCAAGAGAAACATCTAAAGATAACGCCGTTGAACCCTGGAAGTAGTAGTAATTGTGTGTATCATTCAGCTGAGGATTTCGCTACGAAATATGGGAATGTGAACCAGGGAACTTTCCTCCCTGAACCATTTCATAACTATGTTGAGTATCTTACAGAAGCCTCGCCATATCTTCCTAATATTACTGCCGATTATGCACTTGGGAGCTTACCCAATGTTAATGGGTTCAATAGGACGGACTCAAACTTCTTCTACAATGATCCAGGAAAAGCACTCTGTTTTAAAGCTCCTGTTGCTTCTGCTGGGACTGACTTCAGGAAGGTGGGGCTTTGGGGACCAAATAGTGAAGGCCACCAATCCAAGAAATTTGCAGCTAGCCAATTCAATCATCATGCCGAGGGCCAGGCTCCGTGGAGGGCTGAATCAACTGGAGATAAACGTTCTTCTTTGAAACTTGATCCAAGGGTAACAGTAGCTGAACCTGGTTTCCTTCCCAAATCAAAAAGTAGTCCATCAAAACAGAAAGCCATTACAACTGACCGTCAACGCAGGCAACGAATTGCTGATAACCTCAAAGCTTTGCACGGCTTGCTACCAGCTCCATCAGAGGGTTGCTCAGCGTATATACTGGATGACGTCATTGACTATGTCAAATATTTGCAGCTTCAGATAAAGGAATTAAGTGGAAGAAGATTGCTGGGTGAATCAACTGCTATGCCACTCACATTCCGCGAGGGTTATGGCCACTATATTAACCAGCAGATGCTGAATGAACCTCTTGAGGAGATGATGGGAAAACTAGTTGAGGAAAATCCGGCAGCAGCAGCACAGCTGTTAGAGAGTAAGGGCCTTTTTATGTTGCCTTTGTCTTTGGCTGAAGACTTGCGCCTGGCTATGCAGACGTTTGGTGGCGTTCCTCGAGTCTAA 942 0.4501 MEGQSNQEKHLKITPLNPGSSSNCVYHSAEDFATKYGNVNQGTFLPEPFHNYVEYLTEASPYLPNITADYALGSLPNVNGFNRTDSNFFYNDPGKALCFKAPVASAGTDFRKVGLWGPNSEGHQSKKFAASQFNHHAEGQAPWRAESTGDKRSSLKLDPRVTVAEPGFLPKSKSSPSKQKAITTDRQRRQRIADNLKALHGLLPAPSEGCSAYILDDVIDYVKYLQLQIKELSGRRLLGESTAMPLTFREGYGHYINQQMLNEPLEEMMGKLVEENPAAAAQLLESKGLFMLPLSLAEDLRLAMQTFGGVPRV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1900 313 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 82 296 - -
Acco02g1900 313 CDD bHLH_AtbHLH_like 184 233 IPR045239 -
Acco02g1900 313 MobiDBLite consensus disorder prediction 165 187 - -
Acco02g1900 313 Gene3D - 174 242 IPR036638 GO:0046983
Acco02g1900 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
Acco02g1900 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 236 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1900 Acco-ChrAcco02 15153833 15156489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1900 185 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 39.669 5.31e-20 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco02g1900 None None None