Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1898 ATGGCGACCGCATGCTCAATAAAAGGGAAGAGAATTGGTGACGGAGTTTCACTCTTGAACTCCAACAAGAGAAAAGAAACCTTGTTCAGAAAATGTCACGAGCTTACTGTGAAGAGCGACGCTGAGGTTAGTTTGGTGTGTATTGGACCTGACGGAAAAATTGAGGCATGGCCCAATCATGAGAAAGTGAAGGCCATGCTCATTAAGCACAGAGAGAAGCAAGCTGGGAAGAAGAAGAACAATGGCGAGTTCTCACTCGAGTCCGAATCGCAGGAGGAGGAGGAGAAGAAGAAATCAGCGACCGATTCGCCTGGGAAGCTTTCTGCAGAGTCAATGATGACTCTGTTAACGGAAATTGATTCGAAGCTAGAAGCCCTAGATGAGAAAATCAAGATGCTGAGTATCCAAAAAGCCACTGATTTTTGTGATAGTCCGAATAATTCTGGGGATTTCATGGAAATTTATGATTGGCATGATCAGTCAATAAACACGATAGAATCGTACGGTCAACCACCGGCTTGTTCTGTACAATTAAATCAACCAATAGTTGTTTCTGCTGATGAAGATTATTCGTTTGTTAGCAATATGGGCAACCAGAGTGAGTGGGATTCTCAGAATACTGATAGTTTTGCTCTGAATCATATCTGGGAGCCAGAACTAGAATTGCTTGGGTCACAGGAATGGATGGGGAATGGACGAGATGATGTTGAAGCATTGCAGAATTACTATTTGGGAAGCGATTATTGGAATCAACTGCTTCGGTAG 765 0.4327 MATACSIKGKRIGDGVSLLNSNKRKETLFRKCHELTVKSDAEVSLVCIGPDGKIEAWPNHEKVKAMLIKHREKQAGKKKNNGEFSLESESQEEEEKKKSATDSPGKLSAESMMTLLTEIDSKLEALDEKIKMLSIQKATDFCDSPNNSGDFMEIYDWHDQSINTIESYGQPPACSVQLNQPIVVSADEDYSFVSNMGNQSEWDSQNTDSFALNHIWEPELELLGSQEWMGNGRDDVEALQNYYLGSDYWNQLLR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1898 254 MobiDBLite consensus disorder prediction 71 103 - -
Acco02g1898 254 Gene3D - 22 100 IPR036879 GO:0003677|GO:0046983
Acco02g1898 254 SUPERFAMILY SRF-like 22 72 IPR036879 GO:0003677|GO:0046983
Acco02g1898 254 Coils Coil 116 136 - -
Acco02g1898 254 ProSiteProfiles MADS-box domain profile. 22 61 IPR002100 GO:0003677|GO:0046983
Acco02g1898 254 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 22 57 IPR002100 GO:0003677|GO:0046983
Acco02g1898 254 MobiDBLite consensus disorder prediction 71 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1898 24 137 MADS-box Gene Family AT5G65330 27.966 4.48e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Acco02g1898 SRF-TF 9.7e-09 No_clan