Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1886 ATGGATTGGTTGAAGATATACGTTCCATATGATGGTCATGGAAGAGCGAAGCGAGACGAGGACGGAGCAACCCCGCCGTATCGCCGAATCGCCAGTATTTTGTTGCTGCTTCTACTGCCACTGTTTTGTTTCCCTCCATTCGCATCAATGGCGGCTCACTCCTCCTTCGCTGGCCCTTCTGGAGTTCGAGTCGCCGTCGTCGGTGACCGAGGTACCGGCAAATCTAGTTTGATAGCTGCTGCGGCTTCTGAGTCCTTCCCTGACACCGTCCCCCCTGTCCTTCCACCCACCCTGTTGCCTGATGATTGGTTCCCTGATCGTCTTCCGCTTACTATCATTGACACTTCTTCCAGTTTGGAAAAACGGGGCAAGCGCAATGAAGAACTGAAGCGAGCTGATGTAGTGGTTTTGACATATGCTTGTGATGAACCAACGACCATTAGTCGTCTTAGTACTTGCTGGCTCCCTGAATTGAAGGAGTTGGAGGTAAAGGCACCTGTGGTTGTGGTTGGTTGCAAGCTAGATCTACAGGATGAGAATCAGCAAATAAACTTAGAGAATCTCATGAAGCAGCTCCTACAACAGTTCAGTGACATTGTGACCTGCATGGAATGCTCTGCAGCTACACTATATCAGGTCCCTGAAGTTTTTTATTTTGCTCAAAAAGCAGTACTGCATCCAGTGGATCCATTGTTTGATCATGAGAGGCAAGCTTTAACAGATAAATGTTTAAGGGCGCTGAGAAGAATTTTTGTTCTCTGTGATAGAGACATGGATGATTCCCTCAATGACGCAGAGCTAAATGGATTTCAGGGTAGATGTTTTGACATGCCATTGCAGCCATCCGAAATTGTGGAAGTCAGAACAATTATTCAGCAGCAAGCACCTGAGGGAATTAATCAGCATGGTCTTACTTTTCCTGGCTTTGTTTATATCAATAATATGTTCCTGAAGAAAGGGCGTCCTGAGGAAATGTGGGCCGTTCTAAGAAAATTTGGATACAATAATGATTTGAAACTCCGAGATGATTTTCTTCCAGTTCCATCTAACTATGCATCTGATCAGAGAGTGGAGCTGACAAGTGAAGCTGTAGAATTTCTGAATGGTACCTTCCGATTGTTAGATACTGATAGAGACCGAGCCCTACAACCTGCAGAGCTTGATAAGCTATTTTCTACTGCCCCAGAAAGTCCATGGAGTGATGATCCTTATAAGGATGCTGTTGAGAGAACTGGTGCAGGCTACATGACTCTTGGTGGATTTCTGTCTCAGTGGGCTCTCATGACATTACTTGATCCACCATCTAGCCTGGCTAATTTGATTTACATTGGATATAGTGGCAATCCAGCTGCAGCACTCCGTGTTACTCGTAGGAGATCAGTAGACCGTAAGAAACAAAAAGCAGAAAGAAATGTGTTCCAGTGCTATGTCTTTGGTTCTAAAAATTCAGGGAAATCTACTTTATTATATTCATTTTTGAGAAGGCCTTTCTCTGATAAATATACTCCGACAATGGTTGAGCAATATGCTGCAAATGTTGTTGAATTAATTGGGGGGACTAGAAAGACTCTTATTTTGCGGGAGATACCTGAGGATGAAGTAAAGAATTTTTTGTCAAATCGGGATTGCTTGGCAGCATCTGATGTTGCTGCTTTTGTATATGACAGTTCAGATGAAAATTCGTGGAAAAGAGCTAGAGAATTGCTTGAGGAAGTTTCTAGACAAGGAGAATTAACTGGTCATAGAGTTCCTTGCCTTCTCATTGCTGCTAAGGATGACTTAACTCCATACCCAAGGGCATTACAAGATTCAGTTAAGGTAACCGAGGAATTGGGGATTGAAGCGCCCATTCGTGTAAGCATGAAATTAGGCGATTCAAGTAACGTGTATGGTAAGATTGTTAGTGCAGCAGAACACCCTCATTTGAATATTCCTGAAACTGATATTGGGAGGAAGAGAAGGCTGTACCATCAGCTTCTTCATCACACTCTTATATTTGCCTCAGTTGGGGCTGCAATGGCAGTTGTCGGTTTAGCAGCTTTCCGTGGACATGCGATAAAGAAAAATTCTTCTTAG 2076 0.4374 MDWLKIYVPYDGHGRAKRDEDGATPPYRRIASILLLLLLPLFCFPPFASMAAHSSFAGPSGVRVAVVGDRGTGKSSLIAAAASESFPDTVPPVLPPTLLPDDWFPDRLPLTIIDTSSSLEKRGKRNEELKRADVVVLTYACDEPTTISRLSTCWLPELKELEVKAPVVVVGCKLDLQDENQQINLENLMKQLLQQFSDIVTCMECSAATLYQVPEVFYFAQKAVLHPVDPLFDHERQALTDKCLRALRRIFVLCDRDMDDSLNDAELNGFQGRCFDMPLQPSEIVEVRTIIQQQAPEGINQHGLTFPGFVYINNMFLKKGRPEEMWAVLRKFGYNNDLKLRDDFLPVPSNYASDQRVELTSEAVEFLNGTFRLLDTDRDRALQPAELDKLFSTAPESPWSDDPYKDAVERTGAGYMTLGGFLSQWALMTLLDPPSSLANLIYIGYSGNPAAALRVTRRRSVDRKKQKAERNVFQCYVFGSKNSGKSTLLYSFLRRPFSDKYTPTMVEQYAANVVELIGGTRKTLILREIPEDEVKNFLSNRDCLAASDVAAFVYDSSDENSWKRARELLEEVSRQGELTGHRVPCLLIAAKDDLTPYPRALQDSVKVTEELGIEAPIRVSMKLGDSSNVYGKIVSAAEHPHLNIPETDIGRKRRLYHQLLHHTLIFASVGAAMAVVGLAAFRGHAIKKNSS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1886 691 FunFam Mitochondrial Rho GTPase 234 338 - -
Acco02g1886 691 ProSiteProfiles small GTPase Rab1 family profile. 467 691 - -
Acco02g1886 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 469 641 IPR027417 -
Acco02g1886 691 ProSiteProfiles Miro domain profile. 59 226 IPR020860 GO:0003924|GO:0005525
Acco02g1886 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 259 IPR027417 -
Acco02g1886 691 Gene3D - 536 637 IPR027417 -
Acco02g1886 691 PRINTS Transforming protein P21 ras signature 202 224 - -
Acco02g1886 691 PRINTS Transforming protein P21 ras signature 163 176 - -
Acco02g1886 691 PRINTS Transforming protein P21 ras signature 62 83 - -
Acco02g1886 691 FunFam Mitochondrial Rho GTPase 340 530 - -
Acco02g1886 691 SMART rho_sub_3 64 227 IPR001806 GO:0003924|GO:0005525
Acco02g1886 691 Gene3D - 340 530 - -
Acco02g1886 691 SUPERFAMILY EF-hand 231 427 IPR011992 -
Acco02g1886 691 ProSitePatterns EF-hand calcium-binding domain. 255 267 IPR018247 -
Acco02g1886 691 CDD Miro2 469 648 - -
Acco02g1886 691 PIRSF Miro 58 691 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0005741|GO:0007005
Acco02g1886 691 Gene3D - 234 338 - -
Acco02g1886 691 SMART rab_sub_5 62 227 - -
Acco02g1886 691 PANTHER RHO FAMILY GTPASE 474 608 IPR003578 GO:0005525|GO:0007264
Acco02g1886 691 Pfam EF hand associated 399 467 IPR013566 -
Acco02g1886 691 Pfam EF hand associated 278 362 IPR013567 -
Acco02g1886 691 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Acco02g1886 691 FunFam Mitochondrial Rho GTPase 537 638 - -
Acco02g1886 691 Gene3D - 60 229 IPR027417 -
Acco02g1886 691 ProSiteProfiles Miro domain profile. 470 639 IPR020860 GO:0003924|GO:0005525
Acco02g1886 691 FunFam Mitochondrial Rho GTPase 59 229 - -
Acco02g1886 691 Pfam Ras family 477 602 IPR001806 GO:0003924|GO:0005525
Acco02g1886 691 Pfam Ras family 64 224 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1886 Acco-ChrAcco02 15006076 15019822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1886 50 690 EF-hand Containing Proteins AT3G63150 58.346 0.0 800