Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1848 ATGGCCGCCGGGAAAGATGATGCGATGGAAAAATCTGACTCGAAAGATAAGATTTTTCCTTCAAAGGTGAAGGAGAAGAGCACAATCTTCCTCGATCGCGGAATATGTGTGAGAGCTGATAAGATTGATTTCAAGGACTGGGATAAACAACTAGACAGGCACTTGAGTAAGGTTCTGTCGAGAGCGTCTTCGGGGGAGAAGAAGGAAGACTGGGAAATCGATTACTCCAAATTGGACATAAAGCGTGCAATAGATCACGGAGCCTATGGAACAGTCTACCGTGGCATTTATGACGGGCAAGACGTTGCCGTGAAAATATTTGATTGGAAGGACACCGACGCTGACGCTGCTGCTATTCGGGCATCGTTTCATCAAGAGGTTGCTGCTTGGCATAAACTTAACCATCCAAATGTTACAAAGTTTGTTGGAGCTTCCCTTGGAAACTCGTATGTGAAAATTTCTTCTGAACAAACATCAGGGGAAGTTTATTCATTCATTCCGGCCCAGGCCTGTTGTGTTCTTGAGTTTGTTCCTGGGGGGACGCTAAAGAAGCTTCTGATGAAGAACAGAAGGAAGAAACTTGATTTTGATGTTACAATTAAACTTGCCTTGGACCTTGCCAGAGGTCTGAGTTATCTCCACACGAAAAAGATTGTGCACCGTGATGTGAAGACAGAAAATATTTTGTTGGATGAAAATGGCACTGCAAAAATTGCTGATTTTGGTGTTGCTCGAATTGAGGCTCTCAACCCATGTGAAATGACTGGGGGGGTTGGCACCCCTTGGTACATGGCGCCAGAGGTGCTCAACGGTAAACCTTACAATAAGAAATGCGATGTGTATAGTTTTGGGATATGCTTGTGGGAGATATATTGCTGTGACTTGCCTTATCCTACTCACAAGATTTCTCATGTATTTGCTGGAATTGGTCGACAGAATTTGCGACCAGAAATCCCAAGATGTTGCCCAAGTGCACTTGCAGGAATAATAAGAAGATGTTGGGACGAAGAGCCAGAAAAACGCCCTGAGATGGCAGAAGTAATTAGAATGTTAGAGGCAATAGATTCAAGTAAGGGAGGACGCATGGTTCCAAAAGACCAATCTAGATTTTGGTGTTTTTGTCCTGGGAGAGCCTTTTAA 1140 0.4395 MAAGKDDAMEKSDSKDKIFPSKVKEKSTIFLDRGICVRADKIDFKDWDKQLDRHLSKVLSRASSGEKKEDWEIDYSKLDIKRAIDHGAYGTVYRGIYDGQDVAVKIFDWKDTDADAAAIRASFHQEVAAWHKLNHPNVTKFVGASLGNSYVKISSEQTSGEVYSFIPAQACCVLEFVPGGTLKKLLMKNRRKKLDFDVTIKLALDLARGLSYLHTKKIVHRDVKTENILLDENGTAKIADFGVARIEALNPCEMTGGVGTPWYMAPEVLNGKPYNKKCDVYSFGICLWEIYCCDLPYPTHKISHVFAGIGRQNLRPEIPRCCPSALAGIIRRCWDEEPEKRPEMAEVIRMLEAIDSSKGGRMVPKDQSRFWCFCPGRAF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1848 379 SUPERFAMILY Protein kinase-like (PK-like) 65 351 IPR011009 -
Acco02g1848 379 ProSiteProfiles Protein kinase domain profile. 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1848 379 Pfam Protein tyrosine and serine/threonine kinase 79 351 IPR001245 GO:0004672|GO:0006468
Acco02g1848 379 CDD STKc_MAP3K-like 84 351 - -
Acco02g1848 379 Gene3D Phosphorylase Kinase; domain 1 67 157 - -
Acco02g1848 379 SMART serkin_6 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g1848 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 357 - -
Acco02g1848 379 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Acco02g1848 379 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672|GO:0006468
Acco02g1848 379 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Acco02g1848 379 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Acco02g1848 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Acco02g1848 379 Gene3D Transferase(Phosphotransferase) domain 1 179 368 - -
Acco02g1848 379 FunFam Kinase suppressor of Ras 1 67 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1848 Acco-ChrAcco02 14687349 14689178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1848 38 374 MAP Kinase Kinase Kinase AT3G22750 62.209 3.78e-160 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco02g1848 PK_Tyr_Ser-Thr 1.1e-57 CL0016