Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g1824 ATGAGTCAGAAAAAGAACCCTCTTGTGTTTCTAGACCTGTCAATTGATGGGGATCCTGTGGAAAGACTTGTTATTGAGCTTTTTGCCAGTATTGTTCCTAAGACAGCCGAAAATTTTCGGGCACTATGCACAGGTGAGAAAGGCATTGGCAAATCAACTGGAAAGCCTTTGCATTACCGAGGAACCAGTTTCCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCTGATGAAAATTTTATATTAAAGCATGATGGACCTGGTCTTCTATCTATGGCTAATGGTGGTCCACACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTTAGTGGATTAGATCTTCTGAAGAAAATTGAATTGCTGGGGACACCAGATGGGAAACCTGTTCGGCCAGTTAAAATAATGGATTGCGGTGAAACCACTGAAGCGAAAATTCAGCAAAAAATTGGGAAAGAGAAAGGTGAAAAGAGAAAATCTGTTGAATCCTCAACTTCTGATGATAGTTCTGACAAAAAATCAAAAAGAAAAAGGAAGGCATCTTCCAAGGATTTGAGGAAGAGGAGGAGATACTCAACATCTGATTCATACAGCTCAAACAGTGATAGTGATTCTGTTTCTTCAGACTCTGACTCAGATTCAGGGTCAGAATCATCACTTTCTGACTCAAGTTCTTCCAGCTATGGTAAACATCGTAAGAGGAAACCTGTGAAAAGATCTAGGCACAAGCAGGGGAAGAAGAGAAGAAATGGACGAAAGCAGAAGAGAAGCCGGCATAATAGACGATCTGGACGCAAGTCCAGATGGAGCTCAGAAGATTCAAGTGATACTGAAAGTGATAGTACTAGTGGTAGTGACAGCAGTTCTGATGATGAGAAAGCTCATCGCCGTGTCTCTGGTCGTAAAGCACATGCTGAGAACAAACAGAAAAGAAATTTAGAAACCGGGAAGCAATCTCCCAGCCCTCCTTTATTTAAAACTGCTTCAGATCGGGGAGAAGATTCAAAGGTCAGAAGAACTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCTGAGTTTCTGAATAATGGGCATGATACTGAAGCCAAATTCAGTAAAGCTGCTAAGCAACCCACTCATTTGGATGATTCTAATGACAATAGAGGTGCAAGTCCTAGAAGAAGTGATGCTATGAGTCCCAATAGGAAGTTAGTTGAGCAAAACCAAGGAGGTGCTATGTTGACGAGTCCTCGCAAACCCGCTGCCTCCAAACATAGTCAGGGTTTGTCAAAAAGCCCTTCACCAAATGGTGAACCAAAGCGTATTAGAAAAGGACGTGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGTCACCCCATCCCTATCACCGTGGTGATAGAAATATAAGGAGGAACTTCGACAGGCATACAAGCTACAGAAACTACTCTGAGCGTTCACCACAGAGACGCTATGGAAGCCCTCCAAGGCGCAGGAGCCGTCCGAGATACCAAAGCAGAAGAAGCCGGAGTCGGAGCGTCTCTCACAGTCCAGTGCGTGGCCGTTTTAGAGACCGTGGTCGCAGCCAGAGTCCAACACGTAGCCCCACTCCAGACGGCAGGCGAGCTCCAATAAGTGATAGATTAAAATCCCGTCTTGGTCCTCAAAGAGTTCGGCACTCTCCAGACAGAGGAGGGGCCAGGTCCCATTCCAGGGATCATTTGTCTCCCCCAAGATCCCCCGATGCCACCCCACCCAGGCGTCATGATAAAAGGACTTCTGTATCTCCAAGCAGGTCTAGATCTAGTTCATCTGGACAGAAGGGATTAGTTTCCTACGGAGAGGTCAGTCCTGATTCCGGGGCAAGGTAG 1989 0.4525 MSQKKNPLVFLDLSIDGDPVERLVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYRGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPHTNGSQFFITFKRQPHLDGKHVVFGKVVSGLDLLKKIELLGTPDGKPVRPVKIMDCGETTEAKIQQKIGKEKGEKRKSVESSTSDDSSDKKSKRKRKASSKDLRKRRRYSTSDSYSSNSDSDSVSSDSDSDSGSESSLSDSSSSSYGKHRKRKPVKRSRHKQGKKRRNGRKQKRSRHNRRSGRKSRWSSEDSSDTESDSTSGSDSSSDDEKAHRRVSGRKAHAENKQKRNLETGKQSPSPPLFKTASDRGEDSKVRRTEDKQSHEEGELSPENSEFLNNGHDTEAKFSKAAKQPTHLDDSNDNRGASPRRSDAMSPNRKLVEQNQGGAMLTSPRKPAASKHSQGLSKSPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRSPHPYHRGDRNIRRNFDRHTSYRNYSERSPQRRYGSPPRRRSRPRYQSRRSRSRSVSHSPVRGRFRDRGRSQSPTRSPTPDGRRAPISDRLKSRLGPQRVRHSPDRGGARSHSRDHLSPPRSPDATPPRRHDKRTSVSPSRSRSSSSGQKGLVSYGEVSPDSGAR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g1824 662 MobiDBLite consensus disorder prediction 320 347 - -
Acco02g1824 662 MobiDBLite consensus disorder prediction 228 260 - -
Acco02g1824 662 CDD cyclophilin_ABH_like 7 173 - -
Acco02g1824 662 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Acco02g1824 662 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Acco02g1824 662 MobiDBLite consensus disorder prediction 264 299 - -
Acco02g1824 662 MobiDBLite consensus disorder prediction 636 650 - -
Acco02g1824 662 MobiDBLite consensus disorder prediction 173 662 - -
Acco02g1824 662 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Acco02g1824 662 MobiDBLite consensus disorder prediction 532 556 - -
Acco02g1824 662 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Acco02g1824 662 MobiDBLite consensus disorder prediction 469 523 - -
Acco02g1824 662 MobiDBLite consensus disorder prediction 401 422 - -
Acco02g1824 662 MobiDBLite consensus disorder prediction 580 635 - -
Acco02g1824 662 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Acco02g1824 662 MobiDBLite consensus disorder prediction 180 209 - -
Acco02g1824 662 Gene3D - 1 182 IPR029000 -
Acco02g1824 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Acco02g1824 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Acco02g1824 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Acco02g1824 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Acco02g1824 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Acco02g1824 662 MobiDBLite consensus disorder prediction 363 387 - -
Acco02g1824 662 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Acco02g1824 662 MobiDBLite consensus disorder prediction 433 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g1824 Acco-ChrAcco02 14325941 14330311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g1824 23 171 U-box Gene Family AT5G67530 47.682 1.87e-32 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1824 02 14325941 14330311 Acco02g1824 02 14325941 14330311 ECH